Class Readers.Genotype

java.lang.Object
io.jenetics.xml.Readers.Genotype
Enclosing class:
Readers

public static final class Readers.Genotype extends Object
Writer methods for Genotype objects.

XML format

 
 <genotype length="2" ngenes="5">
     <double-chromosome length="3">
         <min>0.0</min>
         <max>1.0</max>
         <alleles>
             <allele>0.27251556008507416</allele>
             <allele>0.003140816229067145</allele>
             <allele>0.43947528327497376</allele>
         </alleles>
     </double-chromosome>
     <double-chromosome length="2">
         <min>0.0</min>
         <max>1.0</max>
         <alleles>
             <allele>0.4026521545744768</allele>
             <allele>0.36137605952663554</allele>
         <alleles>
     </double-chromosome>
 </genotype>
  
  • Method Details

    • reader

      public static <A, G extends Gene<A, G>, C extends Chromosome<G>> Reader<Genotype<G>> reader(Reader<? extends C> chromosomeReader)
      Create a genotype reader with the given chromosome reader.
      Type Parameters:
      A - the allele type
      G - the gene type
      C - the chromosome type
      Parameters:
      chromosomeReader - the underlying chromosome reader
      Returns:
      a genotype reader with the given chromosome reader
      Throws:
      NullPointerException - if the given chromosomeReader is null
    • read

      public static <A, G extends Gene<A, G>, C extends Chromosome<G>> Genotype<G> read(InputStream in, Reader<? extends C> chromosomeReader) throws XMLStreamException
      Reads a genotype by using the given chromosome reader.
      Type Parameters:
      A - the allele type
      G - the gene type
      C - the chromosome type
      Parameters:
      in - the input stream to read the genotype from
      chromosomeReader - the used chromosome reader
      Returns:
      a genotype by using the given chromosome reader
      Throws:
      XMLStreamException - if reading the genotype fails
      NullPointerException - if one of the arguments is null