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A

AbstractAlterer<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Abstract implementation of the alterer interface.
AbstractAlterer(double) - Constructor for class io.jenetics.AbstractAlterer
Constructs an alterer with a given recombination probability.
AbstractChromosome<G extends Gene<?,​G>> - Class in io.jenetics
The abstract base implementation of the Chromosome interface.
AbstractChromosome(ISeq<? extends G>) - Constructor for class io.jenetics.AbstractChromosome
Create a new AbstractChromosome from the given genes array.
accept(double) - Method in class io.jenetics.stat.DoubleMomentStatistics
Records a new value into the moments information
accept(double) - Method in class io.jenetics.stat.Quantile
 
accept(int) - Method in class io.jenetics.stat.IntMomentStatistics
Records a new value into the moments information
accept(int) - Method in class io.jenetics.stat.LongMomentStatistics
Records a new value into the moments information
accept(long) - Method in class io.jenetics.stat.LongMomentStatistics
Records a new value into the moments information
accept(C) - Method in class io.jenetics.stat.MinMax
Accept the element for min-max calculation.
accept(EvolutionResult<?, C>) - Method in class io.jenetics.engine.EvolutionStatistics
 
accumulator() - Method in interface io.jenetics.util.Accumulator
 
Accumulator<T,​A extends Accumulator<T,​A,​R>,​R> - Interface in io.jenetics.util
This interface lets you accumulate elements of type T to a result of type R.
after(EvolutionResult<G, C>) - Method in interface io.jenetics.engine.EvolutionInterceptor
This method is called after the evaluation of a generation.
age(long) - Method in class io.jenetics.Phenotype
Return the age of this phenotype depending on the given current generation.
allele() - Method in class io.jenetics.AnyGene
 
allele() - Method in enum io.jenetics.BitGene
 
allele() - Method in class io.jenetics.CharacterGene
 
allele() - Method in class io.jenetics.DoubleGene
 
allele() - Method in class io.jenetics.EnumGene
 
allele() - Method in interface io.jenetics.Gene
Return the allele of this gene.
allele() - Method in class io.jenetics.IntegerGene
 
allele() - Method in class io.jenetics.LongGene
 
alleleIndex() - Method in class io.jenetics.EnumGene
Return the index of the allele this gene is representing.
alter(Seq<Phenotype<G, C>>, long) - Method in interface io.jenetics.Alterer
Alters (recombine) a given population.
alter(Seq<Phenotype<G, C>>, long) - Method in class io.jenetics.Mutator
Concrete implementation of the alter method.
alter(Seq<Phenotype<G, C>>, long) - Method in class io.jenetics.PartialAlterer
 
alter(Seq<Phenotype<G, C>>, long) - Method in class io.jenetics.Recombinator
 
alterations() - Method in class io.jenetics.AltererResult
Return the number of altered individuals.
alterCount() - Method in class io.jenetics.engine.EvolutionResult
The number of altered individuals.
alterDuration() - Method in class io.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for altering the population, in seconds.
altered() - Method in class io.jenetics.engine.EvolutionStatistics
Return the statistics about the altered individuals during the evolution process.
alterer() - Method in class io.jenetics.engine.Engine
Return the used Alterer of the GA.
alterer() - Method in class io.jenetics.engine.Engine.Builder
Return the used Alterer of the GA.
alterer() - Method in class io.jenetics.engine.EvolutionParams
Return the used Alterer of the GA.
alterer() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the used Alterer of the GA.
Alterer<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics
The Alterer is responsible for the changing/recombining the Population.
AltererResult<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Represents the result pair of a Alterer.alter(Seq, long) call, which consists of the altered population and the number of altered individuals.
alterers(Alterer<G, C>, Alterer<G, C>...) - Method in class io.jenetics.engine.Engine.Builder
The alterers used for alter the offspring population.
alterers(Alterer<G, C>, Alterer<G, C>...) - Method in class io.jenetics.engine.EvolutionParams.Builder
The alterers used for alter the offspring population.
andThen(Alterer<G, C>) - Method in interface io.jenetics.Alterer
Returns a composed alterer that applies the this alterer to its input, and then applies the after alterer to the result.
AnyChromosome<A> - Class in io.jenetics
Chromosome implementation, which allows to create genes without explicit implementing the Chromosome interface.
AnyChromosome(ISeq<AnyGene<A>>, Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<A>>, IntRange) - Constructor for class io.jenetics.AnyChromosome
Create a new AnyChromosome from the given genes array.
AnyGene<A> - Class in io.jenetics
Gene implementation, which allows to create genes without explicit implementing the Gene interface.
append(Iterable<? extends T>) - Method in interface io.jenetics.util.ISeq
 
append(Iterable<? extends T>) - Method in interface io.jenetics.util.MSeq
 
append(Iterable<? extends T>) - Method in interface io.jenetics.util.Seq
Return a new Seq with the given values appended.
append(T...) - Method in interface io.jenetics.util.ISeq
 
append(T...) - Method in interface io.jenetics.util.MSeq
 
append(T...) - Method in interface io.jenetics.util.Seq
Return a new Seq with the given values appended.
apply(int) - Method in interface io.jenetics.util.Seq
Return the value at the given index.
apply(Engine.Builder<G, C>) - Method in interface io.jenetics.engine.Engine.Setup
Applies this setup to the given engine builder.
as(Class<C>) - Method in interface io.jenetics.Chromosome
Casts this Chromosome to an instance of type C.
ascending() - Method in enum io.jenetics.Optimize
Create an appropriate comparator of the given optimization strategy.
asISeq() - Method in interface io.jenetics.util.Seq
Return this sequence as ISeq instance.
asList() - Method in interface io.jenetics.util.MSeq
 
asList() - Method in interface io.jenetics.util.Seq
Returns a fixed-size list backed by the specified sequence.
asMSeq() - Method in interface io.jenetics.util.Seq
Return this sequence as MSeq instance.
async(Function<? super Genotype<G>, ? extends Future<C>>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates asynchronous fitness functions.
async(Function<? super T, ? extends Future<C>>, Codec<T, G>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates asynchronous fitness functions.
async(Function<? super T, ? extends Future<C>>, Function<? super Genotype<G>, ? extends T>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates asynchronous fitness functions.
attach(Stream<? extends T>) - Method in class io.jenetics.util.StreamPublisher
Attaches the given stream to the publisher.

B

BaseSeq<T> - Interface in io.jenetics.util
General base interface for a ordered, fixed sized, object sequence.
before(EvolutionStart<G, C>) - Method in interface io.jenetics.engine.EvolutionInterceptor
This method is called right before the evaluation of a generation is started.
before(EvolutionStart<G, C>) - Method in class io.jenetics.engine.FitnessNullifier
Nullifies the fitness values of the population, if requested.
best() - Method in enum io.jenetics.Optimize
Return a null-friendly function which returns the best element of two values.
best(C, C) - Method in enum io.jenetics.Optimize
Return the best value, according to this optimization direction.
bestFitness() - Method in class io.jenetics.engine.EvolutionResult
Return the best population fitness.
bestPhenotype() - Method in class io.jenetics.engine.EvolutionResult
Return the best Phenotype of the result population.
bit() - Method in enum io.jenetics.BitGene
Return the value of the BitGene.
BitChromosome - Class in io.jenetics
Implementation of the classical BitChromosome.
BitChromosome(byte[]) - Constructor for class io.jenetics.BitChromosome
Create a new BitChromosome from the given byte array.
BitChromosome(byte[], int, int) - Constructor for class io.jenetics.BitChromosome
Create a new bit chromosome from the given bit (byte) array.
bitCount() - Method in class io.jenetics.BitChromosome
Returns the number of bits set to true in this BitChromosome.
BitGene - Enum in io.jenetics
Implementation of a BitGene.
BoltzmannSelector<G extends Gene<?,​G>,​N extends Number & Comparable<? super N>> - Class in io.jenetics
In this Selector, the probability for selection is defined as.
BoltzmannSelector() - Constructor for class io.jenetics.BoltzmannSelector
Create a new BoltzmannSelector with a default beta of 4.0.
BoltzmannSelector(double) - Constructor for class io.jenetics.BoltzmannSelector
Create a new BoltzmannSelector with the given b value.
booleanValue() - Method in class io.jenetics.BitChromosome
Return the value of the first gene of this chromosome.
booleanValue() - Method in enum io.jenetics.BitGene
Return the boolean value of this gene.
booleanValue(int) - Method in class io.jenetics.BitChromosome
Return the value on the specified index.
BoundedChromosome<A extends Comparable<? super A>,​G extends BoundedGene<A,​G>> - Interface in io.jenetics
Chromosome interface for BoundedGenes.
BoundedGene<A extends Comparable<? super A>,​G extends BoundedGene<A,​G>> - Interface in io.jenetics
Base interface for genes where the alleles are bound by a minimum and a maximum value.
build() - Method in class io.jenetics.engine.Engine.Builder
Builds an new Engine instance from the set properties.
build() - Method in class io.jenetics.engine.EvolutionParams.Builder
Builds an new EvolutionParams instance from the set properties.
builder() - Static method in class io.jenetics.engine.EvolutionParams
Create a new evolution parameter builder.
builder(Problem<T, G, C>) - Static method in class io.jenetics.engine.Engine
Create a new evolution Engine.Builder for the given Problem.
builder(Function<? super Genotype<G>, ? extends C>, Chromosome<G>, Chromosome<G>...) - Static method in class io.jenetics.engine.Engine
Create a new evolution Engine.Builder with the given fitness function and chromosome templates.
builder(Function<? super Genotype<G>, ? extends C>, Factory<Genotype<G>>) - Static method in class io.jenetics.engine.Engine
Create a new evolution Engine.Builder with the given fitness function and genotype factory.
builder(Function<? super T, ? extends C>, Codec<T, G>) - Static method in class io.jenetics.engine.Engine
Create a new evolution Engine.Builder with the given fitness function and problem codec.
Builder(Evaluator<G, C>, Factory<Genotype<G>>) - Constructor for class io.jenetics.engine.Engine.Builder
Create a new evolution Engine.Builder with the given fitness evaluator and genotype factory.
byExecutionTime(Duration) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncate the evolution stream if the GA execution exceeds a given time duration.
byExecutionTime(Duration, Clock) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncate the evolution stream if the GA execution exceeds a given time duration.
byFitnessConvergence(int, int, double) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncate the evolution stream if the fitness is converging.
byFitnessConvergence(int, int, BiPredicate<DoubleMoments, DoubleMoments>) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncate the evolution stream if the fitness is converging.
byFitnessThreshold(C) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncated the evolution stream if the best fitness of the current population becomes less than the specified threshold and the objective is set to minimize the fitness.
byFixedGeneration(long) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncate the evolution stream after the given number of generations.
byGeneConvergence(double, double) - Static method in class io.jenetics.engine.Limits
A termination method that stops the evolution when a user-specified percentage of the genes (convergedGeneRage) that make up a Genotype are deemed as converged.
byGeneConvergence(Predicate<DoubleMoments>, double) - Static method in class io.jenetics.engine.Limits
A termination method that stops the evolution when a user-specified percentage of the genes (convergedGeneRage) that make up a Genotype are deemed as converged.
byPopulationConvergence(double) - Static method in class io.jenetics.engine.Limits
A termination method that stops the evolution when the population is deemed as converged.
byPopulationConvergence(BiPredicate<Double, DoubleMoments>) - Static method in class io.jenetics.engine.Limits
A termination method that stops the evolution when the population is deemed as converged.
bySteadyFitness(int) - Static method in class io.jenetics.engine.Limits
Return a predicate, which will truncate the evolution stream if no better phenotype could be found after the given number of generations.
byteValue() - Method in class io.jenetics.DoubleGene
 
byteValue() - Method in class io.jenetics.IntegerGene
 
byteValue() - Method in class io.jenetics.LongGene
 
byteValue() - Method in interface io.jenetics.NumericChromosome
Return the byte value of this NumericChromosome at the index 0.
byteValue() - Method in interface io.jenetics.NumericGene
Returns the value of the specified gene as an byte.
byteValue(int) - Method in interface io.jenetics.NumericChromosome
Return the byte value of this NumericChromosome at the given index.

C

CharacterChromosome - Class in io.jenetics
CharacterChromosome which represents character sequences.
CharacterChromosome(ISeq<CharacterGene>, IntRange) - Constructor for class io.jenetics.CharacterChromosome
Create a new chromosome from the given genes array.
CharacterGene - Class in io.jenetics
Character gene implementation.
characteristics() - Method in interface io.jenetics.util.Accumulator
 
charAt(int) - Method in class io.jenetics.CharacterChromosome
 
charAt(int) - Method in class io.jenetics.util.CharSeq
 
CharSeq - Class in io.jenetics.util
This class is used for holding the valid characters of an CharacterGene.
CharSeq(char[]) - Constructor for class io.jenetics.util.CharSeq
Create a new (distinct) CharSeq from the given characters.
CharSeq(CharSequence) - Constructor for class io.jenetics.util.CharSeq
Create a new (distinct) CharSeq from the given characters.
charValue() - Method in class io.jenetics.CharacterGene
Return the char value of this character gene.
chromosome() - Method in class io.jenetics.Genotype
Return the first chromosome.
Chromosome<G extends Gene<?,​G>> - Interface in io.jenetics
A chromosome consists of one or more genes.
clock() - Method in class io.jenetics.engine.Engine.Builder
Return the Clock the engine is using for measuring the execution time.
clock() - Method in class io.jenetics.engine.Engine
Return the Clock the engine is using for measuring the execution time.
clock(Clock) - Method in class io.jenetics.engine.Engine.Builder
The clock used for calculating the execution durations.
close() - Method in class io.jenetics.util.StreamPublisher
Unless already closed, issues onComplete signals to current subscribers, and disallows subsequent attempts to publish.
codec() - Method in interface io.jenetics.engine.Problem
Return the codec, which translates the types of the problem domain into types, which can be understand by the evolution Engine.
Codec<T,​G extends Gene<?,​G>> - Interface in io.jenetics.engine
A problem Codec contains the information about how to encode a given argument type into a Genotype.
Codecs - Class in io.jenetics.engine
This class contains factory methods for creating common problem encodings.
combine(A) - Method in interface io.jenetics.util.Accumulator
Combines this accumulator with the other one.
combine(DoubleMomentStatistics) - Method in class io.jenetics.stat.DoubleMomentStatistics
Combine two DoubleMoments statistic objects.
combine(IntMomentStatistics) - Method in class io.jenetics.stat.IntMomentStatistics
Combine two IntMoments statistic objects.
combine(LongMomentStatistics) - Method in class io.jenetics.stat.LongMomentStatistics
Combine two LongMoments statistic objects.
combine(MinMax<C>) - Method in class io.jenetics.stat.MinMax
Combine two MinMax objects.
combine(Quantile) - Method in class io.jenetics.stat.Quantile
Combine two Quantile objects.
CombineAlterer<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Alters a chromosome by replacing two genes by the result of a given combiner function.
CombineAlterer(BinaryOperator<G>) - Constructor for class io.jenetics.CombineAlterer
Create a new combiner alterer with the given arguments.
CombineAlterer(BinaryOperator<G>, double) - Constructor for class io.jenetics.CombineAlterer
Create a new combiner alterer with the given arguments.
combiner() - Method in class io.jenetics.CombineAlterer
Return the combiner function, used by this alterer.
combiner() - Method in interface io.jenetics.util.Accumulator
 
compare(T, int, int) - Method in interface io.jenetics.util.ProxySorter.Comparator
Compares the two array elements, specified by its indices, for order.
compare(T, T) - Method in enum io.jenetics.Optimize
Compares two comparable objects.
compareTo(G) - Method in interface io.jenetics.BoundedGene
 
compareTo(BitChromosome) - Method in class io.jenetics.BitChromosome
 
compareTo(CharacterGene) - Method in class io.jenetics.CharacterGene
 
compareTo(DoubleGene) - Method in class io.jenetics.DoubleGene
 
compareTo(EvolutionDurations) - Method in class io.jenetics.engine.EvolutionDurations
Compares two durations objects.
compareTo(EvolutionResult<G, C>) - Method in class io.jenetics.engine.EvolutionResult
Compare this evolution result with another one, according the populations best individual.
compareTo(EnumGene<A>) - Method in class io.jenetics.EnumGene
 
compareTo(IntegerGene) - Method in class io.jenetics.IntegerGene
 
compareTo(LongGene) - Method in class io.jenetics.LongGene
 
compareTo(Phenotype<G, C>) - Method in class io.jenetics.Phenotype
 
compareTo(CharSeq) - Method in class io.jenetics.util.CharSeq
 
compareTo(Ordered<T>) - Method in class io.jenetics.util.Ordered
 
completable(Function<? super Genotype<G>, ? extends CompletableFuture<C>>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates asynchronous fitness functions.
completable(Function<? super T, ? extends CompletableFuture<C>>, Codec<T, G>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates asynchronous fitness functions.
completable(Function<? super T, ? extends CompletableFuture<C>>, Function<? super Genotype<G>, ? extends T>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates asynchronous fitness functions.
compose(Alterer<G, C>) - Method in interface io.jenetics.Alterer
Returns a composed alterer that first applies the before alterer to its input, and then applies this alterer to the result.
compose(EvolutionInterceptor<G, C>) - Method in interface io.jenetics.engine.EvolutionInterceptor
Composes this interceptor with the other one.
concat(ISeq<? extends T>, ISeq<? extends T>) - Static method in interface io.jenetics.util.ISeq
Return a sequence whose elements are all the elements of the first sequence followed by all the elements of the second sequence.
concat(ISeq<? extends T>, T...) - Static method in interface io.jenetics.util.ISeq
Return a sequence whose elements are all the elements of the first sequence followed by all the elements of the vararg array.
concat(MSeq<? extends T>, MSeq<? extends T>) - Static method in interface io.jenetics.util.MSeq
Return a sequence whose elements are all the elements of the first sequence followed by all the elements of the second sequence.
concat(MSeq<? extends T>, T...) - Static method in interface io.jenetics.util.MSeq
Return a sequence whose elements are all the elements of the first sequence followed by all the elements of the vararg array.
concat(Seq<? extends T>, Seq<? extends T>) - Static method in interface io.jenetics.util.Seq
Return a sequence whose elements are all the elements of the first sequence followed by all the elements of the second sequence.
concat(Seq<? extends T>, T...) - Static method in interface io.jenetics.util.Seq
Return a sequence whose elements are all the elements of the first sequence followed by all the elements of the vararg array.
concat(T, ISeq<? extends T>) - Static method in interface io.jenetics.util.ISeq
Return a sequence whose elements are all the elements of the first element followed by all the elements of the sequence.
concat(T, MSeq<? extends T>) - Static method in interface io.jenetics.util.MSeq
Return a sequence whose elements are all the elements of the first element followed by all the elements of the sequence.
concat(T, Seq<? extends T>) - Static method in interface io.jenetics.util.Seq
Return a sequence whose elements are all the elements of the first element followed by all the elements of the sequence.
concurrent(Function<? super Genotype<G>, ? extends C>, Executor) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates the fitness function of the population (concurrently) with the given executor.
concurrent(Function<? super T, ? extends C>, Codec<T, G>, Executor) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates the fitness function of the population (concurrently) with the given executor.
concurrent(Function<? super T, ? extends C>, Function<? super Genotype<G>, ? extends T>, Executor) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates the fitness function of the population (concurrently) with the given executor.
constrain(Codec<T, G>) - Method in interface io.jenetics.engine.Constraint
Wraps the given codec into a codec, which obeys this constraint.
constrain(InvertibleCodec<T, G>) - Method in interface io.jenetics.engine.Constraint
Wraps the given codec into a codec, which obeys this constraint.
constrain(Factory<Genotype<G>>) - Method in interface io.jenetics.engine.Constraint
Wraps the given genotype factory into a factory, which only creates individuals obeying this constraint.
constraint() - Method in class io.jenetics.engine.Engine.Builder
Return the constraint of the evolution problem.
constraint() - Method in class io.jenetics.engine.Engine
Return the constraint of the evolution problem.
constraint() - Method in interface io.jenetics.engine.Problem
Return the constraint, associated with this problem, if available.
constraint(Constraint<G, C>) - Method in class io.jenetics.engine.Engine.Builder
The phenotype constraint is used for detecting invalid individuals and repairing them.
Constraint<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
This interface allows you to define constraints on single phenotypes.
contains(char) - Method in class io.jenetics.util.CharSeq
Test whether this character set contains the given character c.
contains(Character) - Method in class io.jenetics.util.CharSeq
Test whether this character set contains the given character c.
contains(Object) - Method in class io.jenetics.util.CharSeq
 
contains(Object) - Method in interface io.jenetics.util.Seq
Returns true if this sequence contains the specified element.
copy() - Method in class io.jenetics.engine.Engine.Builder
Create a new builder, with the current configuration.
copy() - Method in interface io.jenetics.util.Copyable
Return a new copy of type T.
copy() - Method in interface io.jenetics.util.ISeq
Return a shallow copy of this sequence.
Copyable<T> - Interface in io.jenetics.util
This interface indicates, that a class can create a copy of type T.
count() - Method in class io.jenetics.stat.DoubleMoments
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.DoubleSummary
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.IntMoments
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.IntSummary
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.LongMoments
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.LongSummary
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.MinMax
Returns the count of values recorded.
count() - Method in class io.jenetics.stat.Quantile
Return the number of samples the quantile value was calculated of.
crossover(MSeq<G>, MSeq<G>) - Method in class io.jenetics.Crossover
Template method which performs the crossover.
crossover(MSeq<G>, MSeq<G>) - Method in class io.jenetics.IntermediateCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class io.jenetics.LineCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class io.jenetics.MultiPointCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class io.jenetics.SinglePointCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class io.jenetics.UniformCrossover
 
crossover(MSeq<EnumGene<T>>, MSeq<EnumGene<T>>) - Method in class io.jenetics.PartiallyMatchedCrossover
 
Crossover<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Performs a Crossover of two Chromosome.
Crossover(double) - Constructor for class io.jenetics.Crossover
Constructs an alterer with a given recombination probability.
crossoverPointCount() - Method in class io.jenetics.MultiPointCrossover
Return the number of crossover points.

D

decode(Genotype<G>) - Method in interface io.jenetics.engine.Codec
Converts the given Genotype to the target type Codec.
decode(Genotype<G>) - Method in interface io.jenetics.engine.Problem
Converts the given Genotype to the target type Problem.
decoder() - Method in interface io.jenetics.engine.Codec
Return the decoder function which transforms the genotype back to the original problem domain representation.
DEFAULT_ALTER_PROBABILITY - Static variable in interface io.jenetics.Alterer
The default alter probability: 0.2
DEFAULT_CHARACTERS - Static variable in class io.jenetics.CharacterGene
The default character set used by this gene.
DEFAULT_RETRY_COUNT - Static variable in class io.jenetics.engine.RetryConstraint
The default retry-count for creating new, valid phenotypes.
descending() - Method in enum io.jenetics.Optimize
Create an appropriate comparator of the given optimization strategy.
DoubleChromosome - Class in io.jenetics
Numeric chromosome implementation which holds 64 bit floating point numbers.
DoubleChromosome(ISeq<DoubleGene>, IntRange) - Constructor for class io.jenetics.DoubleChromosome
Create a new chromosome from the given genes and the allowed length range of the chromosome.
DoubleGene - Class in io.jenetics
Implementation of the NumericGene which holds a 64 bit floating point number.
DoubleMoments - Class in io.jenetics.stat
Value objects which contains statistical moments.
DoubleMomentStatistics - Class in io.jenetics.stat
A state object for collecting statistics such as count, min, max, sum, mean, variance, skewness and kurtosis.
DoubleMomentStatistics() - Constructor for class io.jenetics.stat.DoubleMomentStatistics
Create an empty moments object.
DoubleRange - Class in io.jenetics.util
Double range class.
doubleStream() - Method in class io.jenetics.DoubleChromosome
Returns a sequential stream of the alleles with this chromosome as its source.
DoubleSummary - Class in io.jenetics.stat
Value objects which contains statistical summary information.
doubleValue() - Method in class io.jenetics.BitChromosome
Return the double value this BitChromosome represents.
doubleValue() - Method in class io.jenetics.DoubleGene
 
doubleValue() - Method in class io.jenetics.IntegerGene
 
doubleValue() - Method in class io.jenetics.LongGene
 
doubleValue() - Method in interface io.jenetics.NumericChromosome
Return the double value of this NumericChromosome at the index 0.
doubleValue() - Method in interface io.jenetics.NumericGene
Returns the value of the specified gene as an double.
doubleValue(int) - Method in interface io.jenetics.NumericChromosome
Return the double value of this NumericChromosome at the given index.
durations() - Method in class io.jenetics.engine.EvolutionResult
Return the timing (meta) information of the evolution step.

E

EliteSelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
The EliteSelector copies a small proportion of the fittest candidates, without changes, into the next generation.
EliteSelector() - Constructor for class io.jenetics.EliteSelector
Create a new elite selector with elite count 1 and the selector for selecting the rest of the population is initialized with TournamentSelector<>(3)
EliteSelector(int) - Constructor for class io.jenetics.EliteSelector
Create a new elite selector with the desired number of elites to be selected.
EliteSelector(int, Selector<G, C>) - Constructor for class io.jenetics.EliteSelector
Create a new elite selector with the desired number of elites to be selected and the selector used for selecting the rest of the population.
EliteSelector(Selector<G, C>) - Constructor for class io.jenetics.EliteSelector
Create a new elite selector with selector used for selecting the rest of the population.
empty() - Static method in class io.jenetics.engine.EvolutionStart
An empty evolution start object, which can be used as initial evolution value.
empty() - Static method in interface io.jenetics.util.ISeq
Return an empty ISeq.
empty() - Static method in interface io.jenetics.util.MSeq
Return an empty MSeq.
empty() - Static method in interface io.jenetics.util.Seq
Return an empty Seq.
EMPTY - Static variable in interface io.jenetics.util.ISeq
Single instance of an empty ISeq.
EMPTY - Static variable in interface io.jenetics.util.MSeq
Single instance of an empty MSeq.
EMPTY - Static variable in interface io.jenetics.util.Seq
Single instance of an empty Seq.
encode(T) - Method in interface io.jenetics.engine.InvertibleCodec
Decodes the given value, which is an element of the native problem domain, into a Genotype.
encoder() - Method in interface io.jenetics.engine.InvertibleCodec
Return the encoder function which transforms a value from the native problem domain back to the genotype.
encoding() - Method in interface io.jenetics.engine.Codec
Return the genotype factory for creating genotypes with the right encoding for the given problem.
Engine<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
Genetic algorithm engine which is the main class.
Engine.Builder<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
Builder class for building GA Engine instances.
Engine.Setup<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
This interface represents a recipe for configuring (setup) a given Engine.Builder.
EnumGene<A> - Class in io.jenetics
Gene which holds enumerable (countable) genes.
equals(BaseSeq<?>, Object) - Static method in interface io.jenetics.util.Seq
Unified method for compare to sequences for equality.
equals(Object) - Method in class io.jenetics.AbstractChromosome
 
equals(Object) - Method in class io.jenetics.AltererResult
 
equals(Object) - Method in class io.jenetics.AnyGene
 
equals(Object) - Method in class io.jenetics.BitChromosome
 
equals(Object) - Method in class io.jenetics.CharacterChromosome
 
equals(Object) - Method in class io.jenetics.CharacterGene
 
equals(Object) - Method in class io.jenetics.DoubleGene
 
equals(Object) - Method in class io.jenetics.engine.EvolutionDurations
 
equals(Object) - Method in class io.jenetics.engine.EvolutionInit
 
equals(Object) - Method in class io.jenetics.engine.EvolutionResult
 
equals(Object) - Method in class io.jenetics.engine.EvolutionStart
 
equals(Object) - Method in class io.jenetics.EnumGene
 
equals(Object) - Method in class io.jenetics.Genotype
 
equals(Object) - Method in class io.jenetics.IntegerGene
 
equals(Object) - Method in class io.jenetics.LongGene
 
equals(Object) - Method in class io.jenetics.MutatorResult
 
equals(Object) - Method in class io.jenetics.Phenotype
 
equals(Object) - Method in class io.jenetics.stat.DoubleMoments
 
equals(Object) - Method in class io.jenetics.stat.DoubleSummary
 
equals(Object) - Method in class io.jenetics.stat.IntMoments
 
equals(Object) - Method in class io.jenetics.stat.IntSummary
 
equals(Object) - Method in class io.jenetics.stat.LongMoments
 
equals(Object) - Method in class io.jenetics.stat.LongSummary
 
equals(Object) - Method in class io.jenetics.util.CharSeq
 
equals(Object) - Method in class io.jenetics.util.DoubleRange
 
equals(Object) - Method in class io.jenetics.util.IntRange
 
equals(Object) - Method in class io.jenetics.util.LongRange
 
equals(Object) - Method in class io.jenetics.util.NanoClock
 
equals(Object) - Method in interface io.jenetics.util.Seq
Compares the specified object with this sequence for equality.
eval(Seq<Phenotype<G, C>>) - Method in class io.jenetics.engine.Engine
Evaluates the fitness function of the given population with the configured Evaluator of this engine and returns a new population with its fitness value assigned.
eval(Seq<Phenotype<G, C>>) - Method in interface io.jenetics.engine.Evaluator
Evaluates the fitness values of the given population.
eval(Function<? super Genotype<G>, ? extends C>) - Method in class io.jenetics.Phenotype
Applies the given fitness function to the underlying genotype and return a new phenotype with the (newly) evaluated fitness function, if not already evaluated.
evaluationDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for evaluating the fitness function of the new individuals.
evaluationDuration() - Method in class io.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for evaluating the fitness function of the new individuals, in seconds.
Evaluator<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
This interface allows to define different strategies for evaluating the fitness functions of a given population.
Evaluators - Class in io.jenetics.engine
This class contains factory methods for creating commonly usable Evaluator implementations.
Evolution<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
This functional interface defines the evolution function, which takes an EvolutionStart object, evolves the population, and returns an EvolutionResult object.
EvolutionDurations - Class in io.jenetics.engine
This class contains timing information about one evolution step.
EvolutionInit<G extends Gene<?,​G>> - Class in io.jenetics.engine
Represents the initialization value of an evolution stream/iterator.
EvolutionInterceptor<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
The evolution interceptor allows to update the EvolutionStart object, before the evolution start, and update the EvolutionResult object after the evolution.
evolutionParams() - Method in class io.jenetics.engine.Engine.Builder
Return the currently set evolution parameters.
evolutionParams(EvolutionParams<G, C>) - Method in class io.jenetics.engine.Engine.Builder
Set the evolution parameters used by the engine.
evolutionParams(EvolutionParams<G, C>) - Method in class io.jenetics.engine.EvolutionParams.Builder
 
EvolutionParams<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
This class collects the parameters which control the behaviour of the evolution process.
EvolutionParams.Builder<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
Builder class for the evolution parameter.
EvolutionResult<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
Represents a state of the GA after an evolution step.
EvolutionStart<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
Represents a state of the GA at the start of an evolution step.
EvolutionStatistics<C extends Comparable<? super C>,​FitnessStatistics> - Class in io.jenetics.engine
This class can be used to gather additional statistic information of an evolution process.
EvolutionStream<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
The EvolutionStream class extends the Java Stream and adds a method for limiting the evolution by a given predicate.
EvolutionStreamable<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
This interface defines the capability of creating EvolutionStreams from a given EvolutionStart object.
evolve(EvolutionStart<G, C>) - Method in class io.jenetics.engine.Engine
 
evolve(EvolutionStart<G, C>) - Method in interface io.jenetics.engine.Evolution
Perform one evolution step with the given evolution start object New phenotypes are created with the fitness function and fitness scaler defined by this engine
evolve(ISeq<Phenotype<G, C>>, long) - Method in interface io.jenetics.engine.Evolution
Perform one evolution step with the given population and generation.
evolveDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for the whole evolve step.
evolveDuration() - Method in class io.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for the whole evolve step, in seconds.
executor() - Method in class io.jenetics.engine.Engine.Builder
Return the Executor the engine is using for executing the evolution steps.
executor() - Method in class io.jenetics.engine.Engine
Return the Executor the engine is using for executing the evolution steps.
executor(Executor) - Method in class io.jenetics.engine.Engine.Builder
The executor used by the engine.
expand(char, char) - Static method in class io.jenetics.util.CharSeq
Expands the characters between a and b.
expand(CharSequence) - Static method in class io.jenetics.util.CharSeq
Expands the character range for the given pattern.
ExponentialRankSelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
An alternative to the "weak" LinearRankSelector is to assign survival probabilities to the sorted individuals using an exponential function.
ExponentialRankSelector() - Constructor for class io.jenetics.ExponentialRankSelector
Create a new selector with default value of 0.975.
ExponentialRankSelector(double) - Constructor for class io.jenetics.ExponentialRankSelector
Create a new exponential rank selector.

F

Factory<T> - Interface in io.jenetics.util
 
FALSE - io.jenetics.BitGene
 
fill(Supplier<? extends T>) - Method in interface io.jenetics.util.MSeq
Fill the sequence with values generated by the given factory.
finisher() - Method in interface io.jenetics.util.Accumulator
 
fitness() - Method in class io.jenetics.engine.EvolutionStatistics
Return the minimal and maximal fitness.
fitness() - Method in interface io.jenetics.engine.Problem
Return the fitness function of the problem in the native problem domain.
fitness() - Method in class io.jenetics.Phenotype
Return the fitness value of this Phenotype.
fitness(Genotype<G>) - Method in interface io.jenetics.engine.Problem
Returns the fitness value for the given argument.
fitness(T) - Method in interface io.jenetics.engine.Problem
Returns the fitness value for the given argument.
FitnessNullifier<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
This class allows to force a reevaluation of the fitness function.
FitnessNullifier() - Constructor for class io.jenetics.engine.FitnessNullifier
 
fitnessOptional() - Method in class io.jenetics.Phenotype
Return the fitness value of this phenotype, or Optional.empty() if not evaluated yet.
floatValue() - Method in class io.jenetics.BitChromosome
Return the float value this BitChromosome represents.
floatValue() - Method in class io.jenetics.DoubleGene
 
floatValue() - Method in class io.jenetics.IntegerGene
 
floatValue() - Method in class io.jenetics.LongGene
 
floatValue() - Method in interface io.jenetics.NumericChromosome
Return the float value of this NumericChromosome at the index 0.
floatValue() - Method in interface io.jenetics.NumericGene
Returns the value of the specified gene as an float.
floatValue(int) - Method in interface io.jenetics.NumericChromosome
Return the float value of this NumericChromosome at the given index.
forAll(Predicate<? super T>) - Method in interface io.jenetics.util.Seq
Tests whether a predicate holds for all elements of this sequence.
forEach(Consumer<? super T>) - Method in interface io.jenetics.util.BaseSeq
 
fromByteArray(byte[]) - Method in class io.jenetics.util.IO
Creates a, previously serialized, object from the given byte[] array.

G

GaussianMutator<G extends NumericGene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
The GaussianMutator class performs the mutation of a NumericGene.
GaussianMutator() - Constructor for class io.jenetics.GaussianMutator
 
GaussianMutator(double) - Constructor for class io.jenetics.GaussianMutator
 
gene() - Method in class io.jenetics.BitChromosome
 
gene() - Method in interface io.jenetics.Chromosome
Return the first gene of this chromosome.
gene() - Method in class io.jenetics.Genotype
Return the first Gene of the first Chromosome of this Genotype.
Gene<A,​G extends Gene<A,​G>> - Interface in io.jenetics
Genes are the atoms of the Jenetics library.
geneCount() - Method in class io.jenetics.Genotype
Return the number of genes this genotype consists of.
generation() - Method in class io.jenetics.engine.EvolutionInit
Return the generation of the start population.
generation() - Method in class io.jenetics.engine.EvolutionResult
The current generation.
generation() - Method in class io.jenetics.engine.EvolutionStart
Return the generation of the start population.
generation() - Method in class io.jenetics.Phenotype
Return the generation this Phenotype was created.
genotype() - Method in class io.jenetics.Phenotype
This method returns a copy of the Genotype, to guarantee a immutable class.
Genotype<G extends Gene<?,​G>> - Class in io.jenetics
The central class the GA is working with, is the Genotype.
genotypeFactory() - Method in class io.jenetics.engine.Engine.Builder
Return the used genotype Factory of the GA.
genotypeFactory() - Method in class io.jenetics.engine.Engine
Return the used genotype Factory of the GA.
genotypes() - Method in class io.jenetics.engine.EvolutionResult
Return the current list of genotypes of this evolution result.
get() - Method in class io.jenetics.util.Ordered
Return the wrapped value.
get(int) - Method in class io.jenetics.AbstractChromosome
 
get(int) - Method in class io.jenetics.BitChromosome
 
get(int) - Method in class io.jenetics.Genotype
Return the chromosome at the given index.
get(int) - Method in interface io.jenetics.util.BaseSeq
Return the value at the given index.
getZone() - Method in class io.jenetics.util.NanoClock
 

H

hashCode() - Method in class io.jenetics.AbstractChromosome
 
hashCode() - Method in class io.jenetics.AltererResult
 
hashCode() - Method in class io.jenetics.AnyGene
 
hashCode() - Method in class io.jenetics.BitChromosome
 
hashCode() - Method in class io.jenetics.CharacterChromosome
 
hashCode() - Method in class io.jenetics.CharacterGene
 
hashCode() - Method in class io.jenetics.DoubleGene
 
hashCode() - Method in class io.jenetics.engine.EvolutionDurations
 
hashCode() - Method in class io.jenetics.engine.EvolutionInit
 
hashCode() - Method in class io.jenetics.engine.EvolutionResult
 
hashCode() - Method in class io.jenetics.engine.EvolutionStart
 
hashCode() - Method in class io.jenetics.EnumGene
 
hashCode() - Method in class io.jenetics.Genotype
 
hashCode() - Method in class io.jenetics.IntegerGene
 
hashCode() - Method in class io.jenetics.LongGene
 
hashCode() - Method in class io.jenetics.MutatorResult
 
hashCode() - Method in class io.jenetics.Phenotype
 
hashCode() - Method in class io.jenetics.stat.DoubleMoments
 
hashCode() - Method in class io.jenetics.stat.DoubleSummary
 
hashCode() - Method in class io.jenetics.stat.IntMoments
 
hashCode() - Method in class io.jenetics.stat.IntSummary
 
hashCode() - Method in class io.jenetics.stat.LongMoments
 
hashCode() - Method in class io.jenetics.stat.LongSummary
 
hashCode() - Method in class io.jenetics.util.CharSeq
 
hashCode() - Method in class io.jenetics.util.DoubleRange
 
hashCode() - Method in class io.jenetics.util.IntRange
 
hashCode() - Method in class io.jenetics.util.LongRange
 
hashCode() - Method in class io.jenetics.util.NanoClock
 
hashCode() - Method in interface io.jenetics.util.Seq
Returns the hash code value for this sequence.
hashCode(BaseSeq<?>) - Static method in interface io.jenetics.util.Seq
Unified method for calculating the hash code of every Seq implementation.

I

identity() - Static method in interface io.jenetics.engine.EvolutionInterceptor
Return an interceptor object which does nothing.
indexOf(Object) - Method in interface io.jenetics.util.Seq
Returns the index of the first occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
indexOf(Object, int) - Method in interface io.jenetics.util.Seq
Returns the index of the first occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
indexOf(Object, int, int) - Method in interface io.jenetics.util.Seq
Returns the index of the first occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
indexWhere(Predicate<? super T>) - Method in interface io.jenetics.util.Seq
Returns the index of the first element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
indexWhere(Predicate<? super T>, int) - Method in interface io.jenetics.util.Seq
Returns the index of the first element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
indexWhere(Predicate<? super T>, int, int) - Method in interface io.jenetics.util.Seq
Returns the index of the first element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
infinite() - Static method in class io.jenetics.engine.Limits
Return a predicate which always return true.
instances() - Method in interface io.jenetics.util.Factory
Return a new stream of object instances, created by this factory.
instant() - Method in class io.jenetics.util.NanoClock
 
IntegerChromosome - Class in io.jenetics
Numeric chromosome implementation which holds 32 bit integer numbers.
IntegerChromosome(ISeq<IntegerGene>, IntRange) - Constructor for class io.jenetics.IntegerChromosome
Create a new chromosome from the given genes and the allowed length range of the chromosome.
IntegerGene - Class in io.jenetics
NumericGene implementation which holds a 32 bit integer number.
interceptor() - Method in class io.jenetics.engine.Engine.Builder
Return the evolution interceptor.
interceptor() - Method in class io.jenetics.engine.Engine
Return the evolution interceptor.
interceptor(EvolutionInterceptor<G, C>) - Method in class io.jenetics.engine.Engine.Builder
The evolution interceptor, which allows to change the evolution start and result.
IntermediateCrossover<G extends NumericGene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
This alterer takes two chromosome (treating it as vectors) and creates a linear combination of this vectors as result.
IntermediateCrossover() - Constructor for class io.jenetics.IntermediateCrossover
Creates a new intermediate-crossover with default recombination probability (Alterer.DEFAULT_ALTER_PROBABILITY) and a p value of zero, which restricts the recombined chromosomes within the hypercube of the selected chromosomes (vectors).
IntermediateCrossover(double) - Constructor for class io.jenetics.IntermediateCrossover
Creates a new intermediate-crossover with the given recombination probability.
IntermediateCrossover(double, double) - Constructor for class io.jenetics.IntermediateCrossover
Creates a new intermediate-crossover with the given recombination probability and the line-scaling factor p.
IntMoments - Class in io.jenetics.stat
Value objects which contains statistical moments.
IntMomentStatistics - Class in io.jenetics.stat
A state object for collecting statistics such as count, min, max, sum, mean, variance, skewness and kurtosis.
IntMomentStatistics() - Constructor for class io.jenetics.stat.IntMomentStatistics
Create an empty moments object.
IntRange - Class in io.jenetics.util
Integer range class.
intStream() - Method in class io.jenetics.IntegerChromosome
Returns a sequential stream of the alleles with this chromosome as its source.
IntSummary - Class in io.jenetics.stat
Value objects which contains statistical summary information.
intValue() - Method in class io.jenetics.BitChromosome
Return the long value this BitChromosome represents.
intValue() - Method in class io.jenetics.DoubleGene
 
intValue() - Method in class io.jenetics.IntegerGene
 
intValue() - Method in class io.jenetics.LongGene
 
intValue() - Method in interface io.jenetics.NumericChromosome
Return the int value of this NumericChromosome at the index 0.
intValue() - Method in interface io.jenetics.NumericGene
Returns the value of the specified gene as an int.
intValue(int) - Method in interface io.jenetics.NumericChromosome
Return the int value of this NumericChromosome at the given index.
invalidCount() - Method in class io.jenetics.engine.EvolutionResult
Return the number of invalid individuals.
invalids() - Method in class io.jenetics.engine.EvolutionStatistics
Return the statistics about the invalid individuals during the evolution process.
invert() - Method in class io.jenetics.BitChromosome
Invert the ones and zeros of this bit chromosome.
InvertibleCodec<T,​G extends Gene<?,​G>> - Interface in io.jenetics.engine
This interface extends the Codec and allows to encode an object from the problem space to a corresponding Genotype, which is the inverse functionality of the codec.
IO - Class in io.jenetics.util
Class for object serialization.
IO() - Constructor for class io.jenetics.util.IO
 
io.jenetics - package io.jenetics
This is the base package of the Jenetics library and contains all domain classes, like Gene, Chromosome or Genotype.
io.jenetics.engine - package io.jenetics.engine
This package contains classes which performs the actual evolution.
io.jenetics.stat - package io.jenetics.stat
This package contains additional statistics classes which are not available in the Java core library.
io.jenetics.util - package io.jenetics.util
This package contains the collection classes (Seq, ISeq and MSeq) which are used in the public interfaces of the Chromosome and Genotype.
isEmpty() - Method in class io.jenetics.CharacterChromosome
 
isEmpty() - Method in interface io.jenetics.util.BaseSeq
Returns true if this sequence contains no elements.
isEmpty() - Method in class io.jenetics.util.CharSeq
Test whether this character set is empty.
ISeq<T> - Interface in io.jenetics.util
Immutable, ordered, fixed sized sequence.
isEvaluated() - Method in class io.jenetics.Phenotype
A phenotype instance can be created with or without fitness value.
isSorted() - Method in interface io.jenetics.util.Seq
Test whether the given array is sorted in ascending order.
isSorted(Comparator<? super T>) - Method in interface io.jenetics.util.Seq
Test whether the given array is sorted in ascending order.
isValid() - Method in class io.jenetics.AbstractChromosome
 
isValid() - Method in class io.jenetics.AnyChromosome
 
isValid() - Method in class io.jenetics.AnyGene
 
isValid() - Method in class io.jenetics.BitChromosome
Return always true.
isValid() - Method in enum io.jenetics.BitGene
Return always true.
isValid() - Method in interface io.jenetics.BoundedGene
 
isValid() - Method in class io.jenetics.CharacterGene
 
isValid() - Method in interface io.jenetics.Chromosome
 
isValid() - Method in class io.jenetics.DoubleGene
 
isValid() - Method in class io.jenetics.EnumGene
 
isValid() - Method in class io.jenetics.Genotype
Test if this genotype is valid.
isValid() - Method in class io.jenetics.IntegerGene
 
isValid() - Method in class io.jenetics.LongGene
 
isValid() - Method in class io.jenetics.PermutationChromosome
Check if this chromosome represents still a valid permutation (or subset) of the given valid alleles.
isValid() - Method in class io.jenetics.Phenotype
Test whether this phenotype is valid.
isValid() - Method in interface io.jenetics.util.Verifiable
Check if this object is valid.
isValidCharacter(Character) - Method in class io.jenetics.CharacterGene
Test, if the given character is valid.
iterator() - Method in interface io.jenetics.util.BaseSeq
 

K

killCount() - Method in class io.jenetics.engine.EvolutionResult
Return the number of killed individuals.
killed() - Method in class io.jenetics.engine.EvolutionStatistics
Return the statistics about the killed individuals during the evolution process.
kurtosis() - Method in class io.jenetics.stat.DoubleMoments
Return the kurtosis of values recorded, or Double.NaN if less than four values have been recorded.
kurtosis() - Method in class io.jenetics.stat.IntMoments
Return the kurtosis of values recorded, or Double.NaN if less than four values have been recorded.
kurtosis() - Method in class io.jenetics.stat.LongMoments
Return the kurtosis of values recorded, or Double.NaN if less than four values have been recorded.

L

lastIndexOf(Object) - Method in interface io.jenetics.util.Seq
Returns the index of the last occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
lastIndexOf(Object, int) - Method in interface io.jenetics.util.Seq
Returns the index of the last occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
lastIndexOf(Object, int, int) - Method in interface io.jenetics.util.Seq
Returns the index of the last occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
lastIndexWhere(Predicate<? super T>) - Method in interface io.jenetics.util.Seq
Returns the index of the last element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
lastIndexWhere(Predicate<? super T>, int) - Method in interface io.jenetics.util.Seq
Returns the index of the last element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
lastIndexWhere(Predicate<? super T>, int, int) - Method in interface io.jenetics.util.Seq
Returns the index of the last element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
length() - Method in class io.jenetics.AbstractChromosome
 
length() - Method in class io.jenetics.BitChromosome
 
length() - Method in class io.jenetics.Genotype
Getting the number of chromosomes of this genotype.
length() - Method in interface io.jenetics.util.BaseSeq
Return the length of this sequence.
length() - Method in class io.jenetics.util.CharSeq
 
limit(long) - Method in interface io.jenetics.engine.EvolutionStreamable
Return a new EvolutionStreamable instance where all created EvolutionStreams are limited to the given number of generations.
limit(Predicate<? super EvolutionResult<G, C>>) - Method in interface io.jenetics.engine.EvolutionStream
Returns a stream consisting of the elements of this stream, truncated when the given proceed predicate returns false.
limit(Supplier<? extends Predicate<? super EvolutionResult<G, C>>>) - Method in interface io.jenetics.engine.EvolutionStreamable
Return a new EvolutionStreamable instance where all created EvolutionStreams are limited by the given predicate.
Limits - Class in io.jenetics.engine
This class contains factory methods for creating predicates, which can be used for limiting the evolution stream.
LinearRankSelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
In linear-ranking selection the individuals are sorted according to their fitness values.
LinearRankSelector() - Constructor for class io.jenetics.LinearRankSelector
Create a new LinearRankSelector with nminus := 0.5.
LinearRankSelector(double) - Constructor for class io.jenetics.LinearRankSelector
Create a new LinearRankSelector with the given values for nminus.
LineCrossover<G extends NumericGene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
This alterer takes two chromosome (treating it as vectors) and creates a linear combination of this vectors as result.
LineCrossover() - Constructor for class io.jenetics.LineCrossover
Creates a new linear-crossover with default recombination probability (Alterer.DEFAULT_ALTER_PROBABILITY) and a p value of zero, which restricts the recombined chromosomes within the hypercube of the selected chromosomes (vectors).
LineCrossover(double) - Constructor for class io.jenetics.LineCrossover
Creates a new linear-crossover with the given recombination probability.
LineCrossover(double, double) - Constructor for class io.jenetics.LineCrossover
Creates a new linear-crossover with the given recombination probability and the line-scaling factor p.
listIterator() - Method in class io.jenetics.BitChromosome
Return a list iterator over the bit-genes of this chromosome.
listIterator() - Method in interface io.jenetics.util.BaseSeq
Returns a list iterator over the elements in this sequence (in proper order).
listIterator() - Method in interface io.jenetics.util.MSeq
Returns a list iterator over the elements in this sequence (in proper sequence).
LongChromosome - Class in io.jenetics
Numeric chromosome implementation which holds 64 bit integer numbers.
LongChromosome(ISeq<LongGene>, IntRange) - Constructor for class io.jenetics.LongChromosome
Create a new chromosome from the given genes and the allowed length range of the chromosome.
LongGene - Class in io.jenetics
NumericGene implementation which holds a 64 bit integer number.
LongMoments - Class in io.jenetics.stat
Value objects which contains statistical moments.
LongMomentStatistics - Class in io.jenetics.stat
A state object for collecting statistics such as count, min, max, sum, mean, variance, skewness and kurtosis.
LongMomentStatistics() - Constructor for class io.jenetics.stat.LongMomentStatistics
Create an empty moments object.
LongRange - Class in io.jenetics.util
Long range class.
longStream() - Method in class io.jenetics.LongChromosome
Returns a sequential stream of the alleles with this chromosome as its source.
LongSummary - Class in io.jenetics.stat
Value objects which contains statistical summary information.
longValue() - Method in class io.jenetics.BitChromosome
Return the long value this BitChromosome represents.
longValue() - Method in class io.jenetics.DoubleGene
 
longValue() - Method in class io.jenetics.IntegerGene
 
longValue() - Method in class io.jenetics.LongGene
 
longValue() - Method in interface io.jenetics.NumericChromosome
Return the long value of this NumericChromosome at the index 0.
longValue() - Method in interface io.jenetics.NumericGene
Returns the value of the specified gene as an long.
longValue(int) - Method in interface io.jenetics.NumericChromosome
Return the long value of this NumericChromosome at the given index.

M

map(Function<? super char[], char[]>) - Method in class io.jenetics.CharacterChromosome
Maps the gene alleles of this chromosome, given as char[] array, by applying the given mapper function f.
map(Function<? super double[], double[]>) - Method in class io.jenetics.DoubleChromosome
Maps the gene alleles of this chromosome, given as double[] array, by applying the given mapper function f.
map(Function<? super int[], int[]>) - Method in class io.jenetics.IntegerChromosome
Maps the gene alleles of this chromosome, given as int[] array, by applying the given mapper function f.
map(Function<? super BitSet, ? extends BitSet>) - Method in class io.jenetics.BitChromosome
Maps the gene alleles of this chromosome, given as BitSet, by applying the given mapper function f.
map(Function<? super long[], long[]>) - Method in class io.jenetics.LongChromosome
Maps the gene alleles of this chromosome, given as long[] array, by applying the given mapper function f.
map(Function<? super T, ? extends B>) - Method in interface io.jenetics.engine.Codec
Create a new Codec with the mapped result type.
map(Function<? super T, ? extends B>) - Method in interface io.jenetics.util.ISeq
 
map(Function<? super T, ? extends B>) - Method in interface io.jenetics.util.MSeq
 
map(Function<? super T, ? extends B>) - Method in interface io.jenetics.util.Seq
Builds a new sequence by applying a function to all elements of this sequence.
map(Function<? super T, ? extends B>, Function<? super B, ? extends T>) - Method in interface io.jenetics.engine.InvertibleCodec
Create a new InvertibleCodec with the mapped result type.
max() - Method in interface io.jenetics.BoundedChromosome
Return the maximum value of this BoundedChromosome.
max() - Method in interface io.jenetics.BoundedGene
Return the allowed max value.
max() - Method in class io.jenetics.DoubleGene
 
max() - Method in class io.jenetics.IntegerGene
 
max() - Method in class io.jenetics.LongGene
 
max() - Method in class io.jenetics.stat.DoubleMoments
Return the maximum value recorded, or Double.NEGATIVE_INFINITY if no values have been recorded.
max() - Method in class io.jenetics.stat.DoubleMomentStatistics
Return the maximum value recorded, or Double.NEGATIVE_INFINITY if no values have been recorded.
max() - Method in class io.jenetics.stat.DoubleSummary
Return the maximum value recorded, or Double.NEGATIVE_INFINITY if no values have been recorded.
max() - Method in class io.jenetics.stat.IntMoments
Return the maximum value recorded, or Integer.MIN_VALUE if no values have been recorded.
max() - Method in class io.jenetics.stat.IntMomentStatistics
Return the maximum value recorded, or Integer.MIN_VALUE if no values have been recorded.
max() - Method in class io.jenetics.stat.IntSummary
Return the maximum value recorded, or Integer.MIN_VALUE if no values have been recorded.
max() - Method in class io.jenetics.stat.LongMoments
Return the maximum value recorded, or Long.MIN_VALUE if no values have been recorded.
max() - Method in class io.jenetics.stat.LongMomentStatistics
Return the maximum value recorded, or Long.MIN_VALUE if no values have been recorded.
max() - Method in class io.jenetics.stat.LongSummary
Return the maximum value recorded, or Long.MIN_VALUE if no values have been recorded.
max() - Method in class io.jenetics.stat.MinMax
Return the current maximal object or null if no element has been accepted yet.
max() - Method in class io.jenetics.util.DoubleRange
Return the maximum value of the double range.
max() - Method in class io.jenetics.util.IntRange
Return the maximum value of the integer range.
max() - Method in class io.jenetics.util.LongRange
Return the maximum value of the long range.
max(double[]) - Static method in class io.jenetics.stat.DoubleSummary
Return the maximum value of the given double array.
max(int[]) - Static method in class io.jenetics.stat.IntSummary
Return the maximum value of the given double array.
max(long[]) - Static method in class io.jenetics.stat.LongSummary
Return the maximum value of the given double array.
max(Comparator<? super T>, T, T) - Static method in class io.jenetics.stat.MinMax
Return the maximum of two values, according the given comparator.
maximalPhenotypeAge() - Method in class io.jenetics.engine.Engine.Builder
Return the maximal allowed phenotype age.
maximalPhenotypeAge() - Method in class io.jenetics.engine.Engine
Return the maximal allowed phenotype age.
maximalPhenotypeAge() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the maximal allowed phenotype age.
maximalPhenotypeAge() - Method in class io.jenetics.engine.EvolutionParams
Return the maximal allowed phenotype age.
maximalPhenotypeAge(long) - Method in class io.jenetics.engine.Engine.Builder
The maximal allowed age of a phenotype.
maximalPhenotypeAge(long) - Method in class io.jenetics.engine.EvolutionParams.Builder
The maximal allowed age of a phenotype.
maximizing() - Method in class io.jenetics.engine.Engine.Builder
Set to a fitness maximizing strategy.
MAXIMUM - io.jenetics.Optimize
GA maximization
mean() - Method in class io.jenetics.stat.DoubleMoments
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
mean() - Method in class io.jenetics.stat.DoubleSummary
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
mean() - Method in class io.jenetics.stat.IntMoments
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
mean() - Method in class io.jenetics.stat.IntSummary
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
mean() - Method in class io.jenetics.stat.LongMoments
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
mean() - Method in class io.jenetics.stat.LongSummary
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
mean(double[]) - Static method in class io.jenetics.stat.DoubleSummary
Returns a double describing the arithmetic mean of the values, or Double.NaN if the values array is empty.
mean(int[]) - Static method in class io.jenetics.stat.IntSummary
Returns a double describing the arithmetic mean of the values, or Double.NaN if the values array is empty.
mean(long[]) - Static method in class io.jenetics.stat.LongSummary
Returns a double describing the arithmetic mean of the values, or Double.NaN if the values array is empty.
mean(DoubleGene) - Method in class io.jenetics.DoubleGene
 
mean(IntegerGene) - Method in class io.jenetics.IntegerGene
 
mean(LongGene) - Method in class io.jenetics.LongGene
 
mean(T) - Method in interface io.jenetics.util.Mean
Return the (usually arithmetic) mean value of this and that.
Mean<T> - Interface in io.jenetics.util
A mixin interface for genes which can have a mean value.
MeanAlterer<G extends Gene<?,​G> & Mean<G>,​C extends Comparable<? super C>> - Class in io.jenetics
Alters a chromosome by replacing two genes by its mean value.
MeanAlterer() - Constructor for class io.jenetics.MeanAlterer
Create a new alterer with alter probability of 0.05.
MeanAlterer(double) - Constructor for class io.jenetics.MeanAlterer
Constructs an alterer with a given recombination probability.
millis() - Method in class io.jenetics.util.NanoClock
 
min() - Method in interface io.jenetics.BoundedChromosome
Return the minimum value of this BoundedChromosome.
min() - Method in interface io.jenetics.BoundedGene
Return the allowed min value.
min() - Method in class io.jenetics.DoubleGene
 
min() - Method in class io.jenetics.IntegerGene
 
min() - Method in class io.jenetics.LongGene
 
min() - Method in class io.jenetics.stat.DoubleMoments
Return the minimum value recorded, or Double.POSITIVE_INFINITY if no values have been recorded.
min() - Method in class io.jenetics.stat.DoubleMomentStatistics
Return the minimum value recorded, or Double.POSITIVE_INFINITY if no values have been recorded.
min() - Method in class io.jenetics.stat.DoubleSummary
Return the minimum value recorded, or Double.POSITIVE_INFINITY if no values have been recorded.
min() - Method in class io.jenetics.stat.IntMoments
Return the minimum value recorded, or Integer.MAX_VALUE if no values have been recorded.
min() - Method in class io.jenetics.stat.IntMomentStatistics
Return the minimum value recorded, or Integer.MAX_VALUE if no values have been recorded.
min() - Method in class io.jenetics.stat.IntSummary
Return the minimum value recorded, or Integer.MAX_VALUE if no values have been recorded.
min() - Method in class io.jenetics.stat.LongMoments
Return the minimum value recorded, or Long.MAX_VALUE if no values have been recorded.
min() - Method in class io.jenetics.stat.LongMomentStatistics
Return the minimum value recorded, or Long.MAX_VALUE if no values have been recorded.
min() - Method in class io.jenetics.stat.LongSummary
Return the minimum value recorded, or Long.MAX_VALUE if no values have been recorded.
min() - Method in class io.jenetics.stat.MinMax
Return the current minimal object or null if no element has been accepted yet.
min() - Method in class io.jenetics.util.DoubleRange
Return the minimum value of the double range.
min() - Method in class io.jenetics.util.IntRange
Return the minimum value of the integer range.
min() - Method in class io.jenetics.util.LongRange
Return the minimum value of the long range.
min(double[]) - Static method in class io.jenetics.stat.DoubleSummary
Return the minimum value of the given double array.
min(int[]) - Static method in class io.jenetics.stat.IntSummary
Return the minimum value of the given double array.
min(long[]) - Static method in class io.jenetics.stat.LongSummary
Return the minimum value of the given double array.
min(Comparator<? super T>, T, T) - Static method in class io.jenetics.stat.MinMax
Return the minimum of two values, according the given comparator.
minimizing() - Method in class io.jenetics.engine.Engine.Builder
Set to a fitness minimizing strategy.
MINIMUM - io.jenetics.Optimize
GA minimization
MinMax<C> - Class in io.jenetics.stat
This consumer class is used for calculating the min and max value according to the given Comparator.
MonteCarloSelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
The Monte Carlo selector selects the individuals from a given population randomly.
MonteCarloSelector() - Constructor for class io.jenetics.MonteCarloSelector
 
MSeq<T> - Interface in io.jenetics.util
Mutable, ordered, fixed sized sequence.
MultiPointCrossover<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Multiple point crossover
MultiPointCrossover() - Constructor for class io.jenetics.MultiPointCrossover
Create a new crossover instance with two crossover points and crossover probability 0.05.
MultiPointCrossover(double) - Constructor for class io.jenetics.MultiPointCrossover
Create a new crossover instance with two crossover points.
MultiPointCrossover(double, int) - Constructor for class io.jenetics.MultiPointCrossover
Create a new crossover instance.
MultiPointCrossover(int) - Constructor for class io.jenetics.MultiPointCrossover
Create a new crossover instance with default crossover probability of 0.05.
mutate(G, Random) - Method in class io.jenetics.GaussianMutator
 
mutate(G, Random) - Method in class io.jenetics.Mutator
Mutates the given gene.
mutate(Chromosome<G>, double, Random) - Method in class io.jenetics.Mutator
Mutates the given chromosome.
mutate(Chromosome<G>, double, Random) - Method in class io.jenetics.SwapMutator
Swaps the genes in the given array, with the mutation probability of this mutation.
mutate(Genotype<G>, double, Random) - Method in class io.jenetics.Mutator
Mutates the given genotype.
mutate(Phenotype<G, C>, long, double, Random) - Method in class io.jenetics.Mutator
Mutates the given phenotype.
mutations() - Method in class io.jenetics.MutatorResult
Return the number of mutations for this mutation result.
Mutator<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
This class is for mutating a chromosomes of an given population.
Mutator() - Constructor for class io.jenetics.Mutator
Default constructor, with probability = 0.01.
Mutator(double) - Constructor for class io.jenetics.Mutator
Construct a Mutation object which a given mutation probability.
MutatorResult<T> - Class in io.jenetics
Represents the result pair of one of the four Mutator.mutate calls.

N

NanoClock - Class in io.jenetics.util
Clock implementation with nano second precision.
nanos() - Method in class io.jenetics.util.NanoClock
This returns the nanosecond-based instant, measured from 1970-01-01T00:00Z (UTC).
NANOS_PER_SECOND - Static variable in class io.jenetics.util.NanoClock
This constants holds the number of nano seconds of one second.
newInstance() - Method in class io.jenetics.AnyChromosome
 
newInstance() - Method in class io.jenetics.AnyGene
 
newInstance() - Method in class io.jenetics.BitChromosome
 
newInstance() - Method in enum io.jenetics.BitGene
Create a new, random gene.
newInstance() - Method in class io.jenetics.CharacterChromosome
Create a new, random chromosome.
newInstance() - Method in class io.jenetics.CharacterGene
 
newInstance() - Method in class io.jenetics.DoubleChromosome
 
newInstance() - Method in class io.jenetics.DoubleGene
 
newInstance() - Method in class io.jenetics.EnumGene
 
newInstance() - Method in interface io.jenetics.Gene
Return a new, random gene with the same type and with the same constraints than this gene.
newInstance() - Method in class io.jenetics.Genotype
Return a new, random genotype by creating new, random chromosomes (calling the Factory.newInstance() method) from the chromosomes of this genotype.
newInstance() - Method in class io.jenetics.IntegerChromosome
 
newInstance() - Method in class io.jenetics.IntegerGene
 
newInstance() - Method in class io.jenetics.LongChromosome
 
newInstance() - Method in class io.jenetics.LongGene
 
newInstance() - Method in class io.jenetics.PermutationChromosome
Create a new, random chromosome.
newInstance() - Method in interface io.jenetics.util.Factory
Create a new instance of type T.
newInstance(double) - Method in class io.jenetics.DoubleGene
Create a new gene from the given value and the gene context.
newInstance(int) - Method in class io.jenetics.IntegerGene
Create a new gene from the given value and the gene context.
newInstance(long) - Method in class io.jenetics.LongGene
Create a new gene from the given value and the gene context.
newInstance(A) - Method in class io.jenetics.AnyGene
 
newInstance(A) - Method in interface io.jenetics.BoundedGene
Create a new gene from the given value and the current bounds.
newInstance(A) - Method in class io.jenetics.EnumGene
Create a new gene from the given value and the gene context.
newInstance(A) - Method in interface io.jenetics.Gene
Create a new gene from the given value and the gene context.
newInstance(ISeq<G>) - Method in interface io.jenetics.Chromosome
A factory method which creates a new Chromosome of specific type and the given genes.
newInstance(ISeq<AnyGene<A>>) - Method in class io.jenetics.AnyChromosome
 
newInstance(ISeq<BitGene>) - Method in class io.jenetics.BitChromosome
 
newInstance(ISeq<CharacterGene>) - Method in class io.jenetics.CharacterChromosome
 
newInstance(ISeq<DoubleGene>) - Method in class io.jenetics.DoubleChromosome
 
newInstance(ISeq<EnumGene<T>>) - Method in class io.jenetics.PermutationChromosome
 
newInstance(ISeq<IntegerGene>) - Method in class io.jenetics.IntegerChromosome
 
newInstance(ISeq<LongGene>) - Method in class io.jenetics.LongChromosome
 
newInstance(Boolean) - Method in enum io.jenetics.BitGene
Create a new gene from the given value.
newInstance(Character) - Method in class io.jenetics.CharacterGene
Create a new character gene from the given character.
newInstance(Double) - Method in class io.jenetics.DoubleGene
 
newInstance(Integer) - Method in class io.jenetics.IntegerGene
 
newInstance(Long) - Method in class io.jenetics.LongGene
 
newInstance(Number) - Method in class io.jenetics.DoubleGene
 
newInstance(Number) - Method in class io.jenetics.IntegerGene
 
newInstance(Number) - Method in class io.jenetics.LongGene
 
newInstance(Number) - Method in interface io.jenetics.NumericGene
 
next() - Method in class io.jenetics.engine.EvolutionResult
Return the next evolution start object with the current population and the incremented generation.
nonEmpty() - Method in interface io.jenetics.util.BaseSeq
Returns true if this sequence contains at least one element.
nonEvaluated() - Method in class io.jenetics.Phenotype
A phenotype instance can be created with or without fitness value.
nullifyFitness() - Method in class io.jenetics.engine.FitnessNullifier
Triggers the nullification of the fitness values of the population for the next generation.
nullifyFitness() - Method in class io.jenetics.Phenotype
Return a phenotype, where the fitness is set to null.
NumericChromosome<N extends Number & Comparable<? super N>,​G extends NumericGene<N,​G>> - Interface in io.jenetics
Numeric chromosome interface.
NumericGene<N extends Number & Comparable<? super N>,​G extends NumericGene<N,​G>> - Interface in io.jenetics
Base interface for numeric genes.

O

object - Static variable in class io.jenetics.util.IO
IO implementation for "native" Java serialization.
of() - Static method in class io.jenetics.CharacterGene
Create a new random character gene, chosen from the CharacterGene.DEFAULT_CHARACTERS.
of() - Static method in class io.jenetics.stat.MinMax
Create a new MinMax consumer.
of(boolean) - Static method in enum io.jenetics.BitGene
Return the corresponding BitGene for the given boolean value.
of(char) - Static method in class io.jenetics.CharacterGene
Create a new character gene from the given character.
of(char, char) - Static method in class io.jenetics.util.CharSeq
Expands the characters between a and b.
of(char, CharSeq) - Static method in class io.jenetics.CharacterGene
Create a new CharacterGene from the give character.
of(double, double) - Static method in class io.jenetics.DoubleChromosome
Create a new random DoubleChromosome of length one.
of(double, double) - Static method in class io.jenetics.DoubleGene
Create a new random DoubleGene.
of(double, double) - Static method in class io.jenetics.util.DoubleRange
Create a new DoubleRange object with the given min and max values.
of(double, double, double) - Static method in class io.jenetics.DoubleGene
Create a new random DoubleGene with the given value and the given range.
of(double, double, int) - Static method in class io.jenetics.DoubleChromosome
Create a new random DoubleChromosome.
of(double, double, IntRange) - Static method in class io.jenetics.DoubleChromosome
Create a new random chromosome.
of(double, DoubleRange) - Static method in class io.jenetics.DoubleGene
Create a new random DoubleGene with the given value and the given range.
of(int) - Static method in class io.jenetics.BitChromosome
Constructing a new BitChromosome with the given _length.
of(int) - Static method in class io.jenetics.CharacterChromosome
Create a new chromosome with the CharacterGene.DEFAULT_CHARACTERS char set as valid characters.
of(int) - Static method in class io.jenetics.util.IntRange
Return a new (half open) range, which contains only the given value: [value, value + 1).
of(int, double) - Static method in class io.jenetics.BitChromosome
Construct a new BitChromosome with the given _length.
of(int, int) - Static method in class io.jenetics.IntegerChromosome
Create a new random IntegerChromosome of length one.
of(int, int) - Static method in class io.jenetics.IntegerGene
Create a new random IntegerGene.
of(int, int) - Static method in class io.jenetics.util.IntRange
Create a new IntRange object with the given min and max values.
of(int, int, int) - Static method in class io.jenetics.IntegerChromosome
Create a new random IntegerChromosome.
of(int, int, int) - Static method in class io.jenetics.IntegerGene
Create a new random IntegerGene with the given value and the given range.
of(int, int, IntRange) - Static method in class io.jenetics.IntegerChromosome
Create a new random chromosome.
of(int, A...) - Static method in class io.jenetics.EnumGene
Create a new enum gene from the given valid genes and the chosen allele index.
of(int, IntRange) - Static method in class io.jenetics.IntegerGene
Create a new random IntegerGene with the given value and the given range.
of(int, ISeq<? extends A>) - Static method in class io.jenetics.EnumGene
Create a new enum gene from the given valid genes and the chosen allele index.
of(long) - Static method in class io.jenetics.util.LongRange
Return a new (half open) range, which contains only the given value: [value, value + 1).
of(long, double, double, double, double) - Static method in class io.jenetics.stat.DoubleSummary
Create an immutable object which contains statistical summary values.
of(long, double, double, double, double, double, double, double) - Static method in class io.jenetics.stat.DoubleMoments
Create an immutable object which contains statistical values.
of(long, int, int, long, double) - Static method in class io.jenetics.stat.IntSummary
Create an immutable object which contains statistical summary values.
of(long, int, int, long, double, double, double, double) - Static method in class io.jenetics.stat.IntMoments
Create an immutable object which contains statistical values.
of(long, long) - Static method in class io.jenetics.LongChromosome
Create a new random LongChromosome of length one.
of(long, long) - Static method in class io.jenetics.LongGene
Create a new random LongGene.
of(long, long) - Static method in class io.jenetics.util.LongRange
Create a new LongRange object with the given min and max values.
of(long, long, int) - Static method in class io.jenetics.LongChromosome
Create a new random LongChromosome.
of(long, long, long) - Static method in class io.jenetics.LongGene
Create a new random LongGene with the given value and the given range.
of(long, long, long, long, double) - Static method in class io.jenetics.stat.LongSummary
Create an immutable object which contains statistical summary values.
of(long, long, long, long, double, double, double, double) - Static method in class io.jenetics.stat.LongMoments
Create an immutable object which contains statistical values.
of(long, long, IntRange) - Static method in class io.jenetics.LongChromosome
Create a new random chromosome.
of(long, LongRange) - Static method in class io.jenetics.LongGene
Create a new random LongGene with the given value and the given range.
of(A...) - Static method in class io.jenetics.EnumGene
Return a new enum gene with an allele randomly chosen from the given valid alleles.
of(A, Supplier<? extends A>) - Static method in class io.jenetics.AnyGene
Create a new AnyGene instance with the given parameters.
of(A, Supplier<? extends A>, Predicate<? super A>) - Static method in class io.jenetics.AnyGene
Create a new AnyGene instance with the given parameters.
of(Alterer<G, C>...) - Static method in interface io.jenetics.Alterer
Combine the given alterers.
of(Alterer<G, C>, int...) - Static method in class io.jenetics.PartialAlterer
Wraps the given alterer, so that it will only work on chromosomes with the given chromosome indices.
of(Alterer<G, C>, IntRange) - Static method in class io.jenetics.PartialAlterer
Wraps the given alterer, so that it will only work on chromosomes with the given chromosome indices.
of(Chromosome<G>, Chromosome<G>...) - Static method in class io.jenetics.Genotype
Create a new Genotype from a given array of Chromosomes.
of(DoubleGene...) - Static method in class io.jenetics.DoubleChromosome
Create a new DoubleChromosome with the given genes.
of(Codec<A, G>, Codec<B, G>, BiFunction<A, B, T>) - Static method in interface io.jenetics.engine.Codec
Converts two given Codec instances into one.
of(InvertibleCodec<T, G>, Predicate<? super T>) - Static method in class io.jenetics.engine.RetryConstraint
Return a new constraint with the given validator and the RetryConstraint.DEFAULT_RETRY_COUNT.
of(InvertibleCodec<T, G>, Predicate<? super T>, int) - Static method in class io.jenetics.engine.RetryConstraint
Return a new constraint with the given validator and retryLimit.
of(InvertibleCodec<T, G>, Predicate<? super T>, Function<? super T, ? extends T>) - Static method in interface io.jenetics.engine.Constraint
Return a new constraint object with the given validator and repairer.
of(Genotype<G>, long) - Static method in class io.jenetics.Phenotype
Create a new phenotype from the given arguments.
of(Genotype<G>, long, C) - Static method in class io.jenetics.Phenotype
Create a new phenotype from the given arguments.
of(IntegerGene...) - Static method in class io.jenetics.IntegerChromosome
Create a new IntegerChromosome with the given genes.
of(LongGene...) - Static method in class io.jenetics.LongChromosome
Create a new LongChromosome with the given genes.
of(Optimize, ISeq<Phenotype<G, C>>, long, long, EvolutionDurations, int, int, int) - Static method in class io.jenetics.engine.EvolutionResult
Return an new EvolutionResult object with the given values.
of(Optimize, ISeq<Phenotype<G, C>>, long, EvolutionDurations, int, int, int) - Static method in class io.jenetics.engine.EvolutionResult
Return an new EvolutionResult object with the given values.
of(DoubleMomentStatistics) - Static method in class io.jenetics.stat.DoubleMoments
Return a new value object of the statistical moments, currently represented by the statistics object.
of(IntMomentStatistics) - Static method in class io.jenetics.stat.IntMoments
Return a new value object of the statistical moments, currently represented by the statistics object.
of(LongMomentStatistics) - Static method in class io.jenetics.stat.LongMoments
Return a new value object of the statistical moments, currently represented by the statistics object.
of(CharSeq) - Static method in class io.jenetics.CharacterGene
Create a new CharacterGene with a randomly chosen character from the set of valid characters.
of(CharSeq, int) - Static method in class io.jenetics.CharacterChromosome
Create a new chromosome with the validCharacters char set as valid characters.
of(CharSeq, IntRange) - Static method in class io.jenetics.CharacterChromosome
Create a new chromosome with the validCharacters char set as valid characters.
of(DoubleRange) - Static method in class io.jenetics.DoubleChromosome
Create a new random DoubleChromosome of length one.
of(DoubleRange) - Static method in class io.jenetics.DoubleGene
Create a new random DoubleGene.
of(DoubleRange, int) - Static method in class io.jenetics.DoubleChromosome
Create a new random DoubleChromosome.
of(DoubleRange, IntRange) - Static method in class io.jenetics.DoubleChromosome
Create a new random chromosome.
of(Factory<? extends Chromosome<G>>, int) - Static method in class io.jenetics.Genotype
Create a new Genotype which consists of n chromosomes, which are created by the given factory.
of(Factory<Genotype<G>>) - Static method in class io.jenetics.engine.RetryConstraint
Return a new constraint with the given genotype factory.
of(Factory<Genotype<G>>, Function<? super Genotype<G>, ? extends T>) - Static method in interface io.jenetics.engine.Codec
Create a new Codec object with the given encoding and decoder function.
of(Factory<Genotype<G>>, Function<? super Genotype<G>, ? extends T>, Function<? super T, Genotype<G>>) - Static method in interface io.jenetics.engine.InvertibleCodec
Create a new invertible codec from the given parameters.
of(IntRange) - Static method in class io.jenetics.CharacterChromosome
Create a new chromosome with the CharacterGene.DEFAULT_CHARACTERS char set as valid characters.
of(IntRange) - Static method in class io.jenetics.IntegerChromosome
Create a new random IntegerChromosome of length one.
of(IntRange) - Static method in class io.jenetics.IntegerGene
Create a new random IntegerGene.
of(IntRange, int) - Static method in class io.jenetics.IntegerChromosome
Create a new random IntegerChromosome.
of(IntRange, IntRange) - Static method in class io.jenetics.IntegerChromosome
Create a new random chromosome.
of(ISeq<? extends A>) - Static method in class io.jenetics.EnumGene
Return a new enum gene with an allele randomly chosen from the given valid alleles.
of(ISeq<? extends Codec<?, G>>, Function<? super Object[], ? extends T>) - Static method in interface io.jenetics.engine.Codec
Combines the given codecs into one codec.
of(ISeq<? extends T>) - Static method in class io.jenetics.PermutationChromosome
Create a new, random chromosome with the given valid alleles.
of(ISeq<? extends T>, int) - Static method in class io.jenetics.PermutationChromosome
Create a new, random chromosome with the given valid alleles and the desired length.
of(ISeq<Genotype<G>>, long) - Static method in class io.jenetics.engine.EvolutionInit
Create a new evolution start object with the given population and for the given generation.
of(ISeq<Phenotype<G, C>>, long) - Static method in class io.jenetics.engine.EvolutionStart
Create a new evolution start object with the given population and for the given generation.
of(LongRange) - Static method in class io.jenetics.LongChromosome
Create a new random LongChromosome of length one.
of(LongRange) - Static method in class io.jenetics.LongGene
Create a new random LongGene.
of(LongRange, int) - Static method in class io.jenetics.LongChromosome
Create a new random LongChromosome.
of(LongRange, IntRange) - Static method in class io.jenetics.LongChromosome
Create a new random chromosome.
of(Seq<? extends T>) - Static method in interface io.jenetics.util.MSeq
Create a new MSeq from the values of the given Seq.
of(Seq<Phenotype<G, C>>) - Static method in class io.jenetics.AltererResult
Return a new alter result for the given arguments.
of(Seq<Phenotype<G, C>>, int) - Static method in class io.jenetics.AltererResult
Return a new alter result for the given arguments.
of(CharSequence) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome from the given character sequence containing '0' and '1'; as created with the BitChromosome.toCanonicalString() method.
of(CharSequence) - Static method in class io.jenetics.util.CharSeq
Expands the character range for the given pattern.
of(CharSequence, double) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome from the given character sequence containing '0' and '1'; as created with the BitChromosome.toCanonicalString() method.
of(CharSequence, int, double) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome from the given character sequence containing '0' and '1'; as created with the BitChromosome.toCanonicalString() method.
of(Iterable<? extends Chromosome<G>>) - Static method in class io.jenetics.Genotype
Create a new Genotype from a given array of chromosomes.
of(Iterable<? extends T>) - Static method in interface io.jenetics.util.ISeq
Create a new ISeq from the given values.
of(Iterable<? extends T>) - Static method in interface io.jenetics.util.MSeq
Create a new MSeq from the given values.
of(Iterable<? extends T>) - Static method in interface io.jenetics.util.Seq
Create a new Seq from the given values.
of(Iterable<DoubleGene>) - Static method in class io.jenetics.DoubleChromosome
Create a new DoubleChromosome with the given genes.
of(Iterable<IntegerGene>) - Static method in class io.jenetics.IntegerChromosome
Create a new IntegerChromosome with the given genes.
of(Iterable<LongGene>) - Static method in class io.jenetics.LongChromosome
Create a new LongChromosome with the given genes.
of(String) - Static method in class io.jenetics.CharacterChromosome
Create a new chromosome from the given genes (given as string).
of(String, CharSeq) - Static method in class io.jenetics.CharacterChromosome
Create a new chromosome from the given genes (given as string).
of(BigInteger) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome from the given big integer value.
of(BigInteger, double) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome from the given big integer value and ones probability.
of(Duration, Duration, Duration, Duration, Duration, Duration, Duration) - Static method in class io.jenetics.engine.EvolutionDurations
Return an new EvolutionDurations object with the given values.
of(BitSet) - Static method in class io.jenetics.BitChromosome
Deprecated, for removal: This API element is subject to removal in a future version.
This method doesn't let you control the actual length of the created BitChromosome. Use BitChromosome.of(BitSet, int, double) or BitChromosome.of(BitSet, int) instead.
of(BitSet, int) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome with the given parameters.
of(BitSet, int, double) - Static method in class io.jenetics.BitChromosome
Create a new BitChromosome with the given parameters.
of(Comparator<? super T>) - Static method in class io.jenetics.stat.MinMax
Create a new MinMax consumer with the given Comparator.
of(DoubleSummaryStatistics) - Static method in class io.jenetics.stat.DoubleSummary
Return a new value object of the statistical summary, currently represented by the statistics object.
of(Function<? super EvolutionStart<G, C>, EvolutionStart<G, C>>, Function<? super EvolutionResult<G, C>, EvolutionResult<G, C>>) - Static method in interface io.jenetics.engine.EvolutionInterceptor
Create a new interceptor instance with the given before and after functions.
of(Function<T, C>, Codec<T, G>) - Static method in interface io.jenetics.engine.Problem
Return a new optimization problem with the given parameters.
of(Function<T, C>, Codec<T, G>, Constraint<G, C>) - Static method in interface io.jenetics.engine.Problem
Return a new optimization problem with the given parameters.
of(Predicate<? super Phenotype<G, C>>) - Static method in interface io.jenetics.engine.Constraint
Return a new constraint object with the given validator.
of(Predicate<? super Phenotype<G, C>>) - Static method in class io.jenetics.engine.RetryConstraint
Return a new constraint with the given validator and the RetryConstraint.DEFAULT_RETRY_COUNT.
of(Predicate<? super Phenotype<G, C>>, int) - Static method in class io.jenetics.engine.RetryConstraint
Return a new constraint with the given validator and retryLimit.
of(Predicate<? super Phenotype<G, C>>, BiFunction<? super Phenotype<G, C>, Long, Phenotype<G, C>>) - Static method in interface io.jenetics.engine.Constraint
Return a new constraint object with the given validator and repairer.
of(Supplier<? extends A>) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters and length one.
of(Supplier<? extends A>) - Static method in class io.jenetics.AnyGene
Create a new AnyGene instance with the given allele supplier.
of(Supplier<? extends A>, int) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, IntRange) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters and length one.
of(Supplier<? extends A>, Predicate<? super A>) - Static method in class io.jenetics.AnyGene
Create a new AnyGene instance with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>, int) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>, IntRange) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<A>>, int) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<A>>, IntRange) - Static method in class io.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends T>, int) - Static method in interface io.jenetics.util.ISeq
Creates a new sequence, which is filled with objects created be the given supplier.
of(Supplier<? extends T>, int) - Static method in interface io.jenetics.util.MSeq
Creates a new sequence, which is filled with objects created be the given supplier.
of(Supplier<? extends T>, int) - Static method in interface io.jenetics.util.Seq
Creates a new sequence, which is filled with objects created be the given supplier.
of(IntSummaryStatistics) - Static method in class io.jenetics.stat.IntSummary
Return a new value object of the statistical summary, currently represented by the statistics object.
of(LongSummaryStatistics) - Static method in class io.jenetics.stat.LongSummary
Return a new value object of the statistical summary, currently represented by the statistics object.
of(Collector<T, ?, R>) - Static method in interface io.jenetics.util.Accumulator
Create a new accumulator from the given collector.
of(T) - Static method in class io.jenetics.MutatorResult
Create a new mutation result with the given result.
of(T...) - Static method in class io.jenetics.PermutationChromosome
Create a new, random chromosome with the given valid alleles.
of(T...) - Static method in interface io.jenetics.util.ISeq
Create a new ISeq from the given values.
of(T...) - Static method in interface io.jenetics.util.MSeq
Create a new MSeq from the given values.
of(T...) - Static method in interface io.jenetics.util.Seq
Create a new Seq from the given values.
of(T, int) - Static method in class io.jenetics.MutatorResult
Create a new mutation result with the given values.
of(T, Comparator<? super T>) - Static method in class io.jenetics.util.Ordered
Make the given value comparable, by using the given comparator.
ofAdjustableEvolution(Supplier<EvolutionStart<G, C>>, Function<? super EvolutionStart<G, C>, ? extends Evolution<G, C>>) - Static method in interface io.jenetics.engine.EvolutionStream
Create a new evolution stream with an adjustable evolution function.
ofAfter(Function<? super EvolutionResult<G, C>, EvolutionResult<G, C>>) - Static method in interface io.jenetics.engine.EvolutionInterceptor
Create a new interceptor instance with the given after function.
ofBefore(Function<? super EvolutionStart<G, C>, EvolutionStart<G, C>>) - Static method in interface io.jenetics.engine.EvolutionInterceptor
Create a new interceptor instance with the given before function.
ofComparable() - Static method in class io.jenetics.engine.EvolutionStatistics
 
ofEvolution(Supplier<EvolutionStart<G, C>>, Evolution<G, C>) - Static method in interface io.jenetics.engine.EvolutionStream
Create a new EvolutionStream from the given start population and evolution function.
offspringAlterDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for altering the offspring population.
offspringFilterDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for removing and replacing invalid offspring individuals.
offspringFraction() - Method in class io.jenetics.engine.Engine.Builder
Return the offspring fraction.
offspringFraction() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the offspring fraction.
offspringFraction() - Method in class io.jenetics.engine.EvolutionParams
Return the offspring fraction.
offspringFraction(double) - Method in class io.jenetics.engine.Engine.Builder
The offspring fraction.
offspringFraction(double) - Method in class io.jenetics.engine.EvolutionParams.Builder
The offspring fraction.
offspringSelectionDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for selecting the offspring population.
offspringSelector() - Method in class io.jenetics.engine.Engine.Builder
Return the used offspring Selector of the GA.
offspringSelector() - Method in class io.jenetics.engine.Engine
Return the used offspring Selector of the GA.
offspringSelector() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the used offspring Selector of the GA.
offspringSelector() - Method in class io.jenetics.engine.EvolutionParams
Return the used offspring Selector of the GA.
offspringSelector(Selector<G, C>) - Method in class io.jenetics.engine.Engine.Builder
The selector used for selecting the offspring population.
offspringSelector(Selector<G, C>) - Method in class io.jenetics.engine.EvolutionParams.Builder
The selector used for selecting the offspring population.
offspringSize() - Method in class io.jenetics.engine.Engine
Return the number of selected offspring.
offspringSize() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the number of offspring.
offspringSize() - Method in class io.jenetics.engine.EvolutionParams
Return the number of offspring.
offspringSize(int) - Method in class io.jenetics.engine.Engine.Builder
The number of offspring individuals.
ofInteger(int) - Static method in class io.jenetics.PermutationChromosome
Create a integer permutation chromosome with the given length.
ofInteger(int, int) - Static method in class io.jenetics.PermutationChromosome
Create an integer permutation chromosome with the given range.
ofInteger(IntRange, int) - Static method in class io.jenetics.PermutationChromosome
Create an integer permutation chromosome with the given range and length
ofLength(int) - Static method in interface io.jenetics.util.MSeq
Create a new MSeq with the given length.
ofMapping(ISeq<? extends A>, ISeq<? extends B>) - Static method in class io.jenetics.engine.Codecs
Create a codec, which creates a a mapping from the elements given in the source sequence to the elements given in the target sequence.
ofMapping(ISeq<? extends A>, ISeq<? extends B>, Supplier<M>) - Static method in class io.jenetics.engine.Codecs
Create a codec, which creates a a mapping from the elements given in the source sequence to the elements given in the target sequence.
ofMatrix(DoubleRange, int, int) - Static method in class io.jenetics.engine.Codecs
Return a 2-dimensional matrix InvertibleCodec for the given range.
ofMatrix(IntRange, int, int) - Static method in class io.jenetics.engine.Codecs
Return a 2-dimensional matrix InvertibleCodec for the given range.
ofMatrix(LongRange, int, int) - Static method in class io.jenetics.engine.Codecs
Return a 2-dimensional matrix InvertibleCodec for the given range.
ofNumber() - Static method in class io.jenetics.engine.EvolutionStatistics
 
ofPermutation(int) - Static method in class io.jenetics.engine.Codecs
Create a permutation InvertibleCodec of integer in the range [0, length).
ofPermutation(ISeq<? extends T>) - Static method in class io.jenetics.engine.Codecs
Create a permutation InvertibleCodec with the given alleles.
ofScalar(DoubleRange) - Static method in class io.jenetics.engine.Codecs
Return a scalar InvertibleCodec for the given range.
ofScalar(IntRange) - Static method in class io.jenetics.engine.Codecs
Return a scalar InvertibleCodec for the given range.
ofScalar(LongRange) - Static method in class io.jenetics.engine.Codecs
Return a scalar InvertibleCodec for the given range.
ofScalar(Supplier<? extends A>) - Static method in class io.jenetics.engine.Codecs
Return a scala Codec with the given allele Supplier and allele validator.
ofScalar(Supplier<? extends A>, Predicate<? super A>) - Static method in class io.jenetics.engine.Codecs
Return a scala Codec with the given allele Supplier and allele validator.
ofSubSet(ISeq<? extends T>) - Static method in class io.jenetics.engine.Codecs
The subset InvertibleCodec can be used for problems where it is required to find the best variable-sized subset from given basic set.
ofSubSet(ISeq<? extends T>, int) - Static method in class io.jenetics.engine.Codecs
The subset InvertibleCodec can be used for problems where it is required to find the best fixed-size subset from given basic set.
ofVector(DoubleRange...) - Static method in class io.jenetics.engine.Codecs
Create a vector InvertibleCodec for the given ranges.
ofVector(DoubleRange, int) - Static method in class io.jenetics.engine.Codecs
Return a vector InvertibleCodec for the given range.
ofVector(IntRange...) - Static method in class io.jenetics.engine.Codecs
Create a vector InvertibleCodec for the given ranges.
ofVector(IntRange, int) - Static method in class io.jenetics.engine.Codecs
Return a vector InvertibleCodec for the given range.
ofVector(LongRange...) - Static method in class io.jenetics.engine.Codecs
Create a vector InvertibleCodec for the given ranges.
ofVector(LongRange, int) - Static method in class io.jenetics.engine.Codecs
Return a vector InvertibleCodec for the given range.
ofVector(Supplier<? extends A>, int) - Static method in class io.jenetics.engine.Codecs
Return a scala Codec with the given allele Supplier and Chromosome length.
ofVector(Supplier<? extends A>, Predicate<? super A>, int) - Static method in class io.jenetics.engine.Codecs
Return a scala Codec with the given allele Supplier, allele validator and Chromosome length.
ofVector(Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<A>>, int) - Static method in class io.jenetics.engine.Codecs
Return a scala Codec with the given allele Supplier, allele validator and Chromosome length.
ONE - Static variable in enum io.jenetics.BitGene
 
oneProbability() - Method in class io.jenetics.BitChromosome
Return the one probability of this chromosome.
ones() - Method in class io.jenetics.BitChromosome
Return the indexes of the ones of this bit-chromosome as stream.
optimize() - Method in class io.jenetics.engine.Engine.Builder
Return the optimization strategy.
optimize() - Method in class io.jenetics.engine.Engine
Return the optimization strategy.
optimize() - Method in class io.jenetics.engine.EvolutionResult
Return the optimization strategy used.
optimize(Optimize) - Method in class io.jenetics.engine.Engine.Builder
The optimization strategy used by the engine.
Optimize - Enum in io.jenetics
This enum determines whether the GA should maximize or minimize the fitness function.
order() - Method in class io.jenetics.Recombinator
Return the number of individuals involved in the Recombinator.recombine(MSeq, int[], long) step.
Ordered<T> - Class in io.jenetics.util
Object wrapper, which makes the wrapped value Comparable, by defining a separate Comparator.

P

parallelStream() - Method in interface io.jenetics.util.Seq
Returns a possibly parallel Stream with this sequence as its source.
PartialAlterer<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
This alterer wraps a given alterer which works on a given section of the genotype's chromosomes.
PartiallyMatchedCrossover<T,​C extends Comparable<? super C>> - Class in io.jenetics
The PartiallyMatchedCrossover (PMX) guarantees that all Genes are found exactly once in each chromosome.
PartiallyMatchedCrossover(double) - Constructor for class io.jenetics.PartiallyMatchedCrossover
 
PermutationChromosome<T> - Class in io.jenetics
This chromosome can be used to model permutations of a given (sub) set of alleles.
PermutationChromosome(ISeq<EnumGene<T>>) - Constructor for class io.jenetics.PermutationChromosome
Create a new PermutationChromosome from the given genes.
Phenotype<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
The Phenotype consists of a Genotype, the current generation and an optional fitness value.
phenotypeAge() - Method in class io.jenetics.engine.EvolutionStatistics
Return the statistics about the individuals age.
plus(EvolutionDurations) - Method in class io.jenetics.engine.EvolutionDurations
Returns a copy of this duration with the specified duration added.
population() - Method in class io.jenetics.AltererResult
Return the altered population.
population() - Method in class io.jenetics.engine.EvolutionInit
Return the initial population.
population() - Method in class io.jenetics.engine.EvolutionResult
Return the population after the evolution step.
population() - Method in class io.jenetics.engine.EvolutionStart
Return the population before the evolution step.
POPULATION_COMPARATOR - Variable in class io.jenetics.ProbabilitySelector
 
populationSize() - Method in class io.jenetics.engine.Engine.Builder
Return the number of individuals of a population.
populationSize() - Method in class io.jenetics.engine.Engine
Return the number of individuals of a population.
populationSize() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the number of individuals of a population.
populationSize() - Method in class io.jenetics.engine.EvolutionParams
Return the population size.
populationSize(int) - Method in class io.jenetics.engine.Engine.Builder
The number of individuals which form the population.
populationSize(int) - Method in class io.jenetics.engine.EvolutionParams.Builder
The number of individuals which form the population.
prepend(Iterable<? extends T>) - Method in interface io.jenetics.util.ISeq
 
prepend(Iterable<? extends T>) - Method in interface io.jenetics.util.MSeq
 
prepend(Iterable<? extends T>) - Method in interface io.jenetics.util.Seq
Return a new Seq with the given values prepended.
prepend(T...) - Method in interface io.jenetics.util.ISeq
 
prepend(T...) - Method in interface io.jenetics.util.MSeq
 
prepend(T...) - Method in interface io.jenetics.util.Seq
Return a new Seq with the given values prepended.
probabilities(Seq<Phenotype<G, C>>, int) - Method in class io.jenetics.ExponentialRankSelector
This method sorts the population in descending order while calculating the selection probabilities.
probabilities(Seq<Phenotype<G, C>>, int) - Method in class io.jenetics.LinearRankSelector
This method sorts the population in descending order while calculating the selection probabilities.
probabilities(Seq<Phenotype<G, C>>, int) - Method in class io.jenetics.ProbabilitySelector
Return an Probability array, which corresponds to the given Population.
probabilities(Seq<Phenotype<G, C>>, int, Optimize) - Method in class io.jenetics.ProbabilitySelector
This method takes the probabilities from the ProbabilitySelector.probabilities(Seq, int) method and inverts it if needed.
probabilities(Seq<Phenotype<G, N>>, int) - Method in class io.jenetics.BoltzmannSelector
 
probabilities(Seq<Phenotype<G, N>>, int) - Method in class io.jenetics.RouletteWheelSelector
 
probability() - Method in class io.jenetics.AbstractAlterer
Return the recombination/alter probability for this alterer.
ProbabilitySelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Probability selectors are a variation of fitness proportional selectors and selects individuals from a given population based on it's selection probability P(i).
ProbabilitySelector() - Constructor for class io.jenetics.ProbabilitySelector
Create a new selector with sorted = false.
ProbabilitySelector(boolean) - Constructor for class io.jenetics.ProbabilitySelector
Create a new ProbabilitySelector with the given sorting flag.
Problem<T,​G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics.engine
This interface describes a problem which can be solved by the GA evolution Engine.
ProxySorter - Class in io.jenetics.util
This sorting methods doesn't sort a given array directly, instead an index lookup array is returned which allows to access the array in an sorted order.
ProxySorter.Comparator<T> - Interface in io.jenetics.util
The comparator used for comparing two array elements at the specified indexes.

Q

quantile() - Method in class io.jenetics.stat.Quantile
Return the quantile this object has been parametrized with.
Quantile - Class in io.jenetics.stat
Implementation of the quantile estimation algorithm published by
Quantile(double) - Constructor for class io.jenetics.stat.Quantile
Create a new quantile accumulator with the given value.

R

random() - Static method in class io.jenetics.util.RandomRegistry
Return the global Random object.
random(ThreadLocal<? extends Random>) - Static method in class io.jenetics.util.RandomRegistry
Set the new global Random object for the GA.
random(Random) - Static method in class io.jenetics.util.RandomRegistry
Set the new global Random object for the GA.
RandomRegistry - Class in io.jenetics.util
This class holds the Random engine used for the GA.
range() - Method in class io.jenetics.DoubleGene
Return the range of this gene.
range() - Method in class io.jenetics.IntegerGene
Return the range of this gene.
range() - Method in class io.jenetics.LongGene
Return the range of this gene.
read(File) - Method in class io.jenetics.util.IO
Reads an object from the given file.
read(InputStream) - Method in class io.jenetics.util.IO
Reads an object from the given input stream.
read(Class<T>, File) - Method in class io.jenetics.util.IO
Reads an object from the given file.
read(Class<T>, InputStream) - Method in class io.jenetics.util.IO
Reads an object from the given input stream.
read(Class<T>, String) - Method in class io.jenetics.util.IO
Reads an object from the given file.
read(Class<T>, Path) - Method in class io.jenetics.util.IO
Reads an object from the given file.
read(String) - Method in class io.jenetics.util.IO
Reads an object from the given file.
read(Path) - Method in class io.jenetics.util.IO
Reads an object from the given file.
Recombinator<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
An enhanced genetic algorithm (EGA) combine elements of existing solutions in order to create a new solution, with some of the properties of each parent.
Recombinator(double, int) - Constructor for class io.jenetics.Recombinator
Constructs an alterer with a given recombination probability.
recombine(MSeq<Phenotype<G, C>>, int[], long) - Method in class io.jenetics.CombineAlterer
 
recombine(MSeq<Phenotype<G, C>>, int[], long) - Method in class io.jenetics.Crossover
 
recombine(MSeq<Phenotype<G, C>>, int[], long) - Method in class io.jenetics.Recombinator
Recombination template method.
repair(Phenotype<G, C>, long) - Method in interface io.jenetics.engine.Constraint
Tries to repair the given phenotype.
repair(Phenotype<G, C>, long) - Method in class io.jenetics.engine.RetryConstraint
 
reset() - Method in class io.jenetics.stat.Quantile
Reset this object to its initial state.
reset() - Static method in class io.jenetics.util.RandomRegistry
Set the random object to it's default value.
result() - Method in class io.jenetics.MutatorResult
Return the mutation result.
result() - Method in class io.jenetics.stat.DoubleMomentStatistics
 
result() - Method in interface io.jenetics.util.Accumulator
Return a copy of the current result of the accumulated elements.
RetryConstraint<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics.engine
This simple Constraint implementation repairs an invalid phenotype by creating new individuals until a valid one has been created.
RetryConstraint(Predicate<? super Phenotype<G, C>>, Factory<Genotype<G>>, int) - Constructor for class io.jenetics.engine.RetryConstraint
Create a new retry-constraint with the given parameters.
reverse() - Method in interface io.jenetics.util.MSeq
Reverses the order of the elements this sequence (in place).
reversed() - Method in interface io.jenetics.util.ProxySorter.Comparator
Returns a comparator that imposes the reverse ordering of this comparator.
RouletteWheelSelector<G extends Gene<?,​G>,​N extends Number & Comparable<? super N>> - Class in io.jenetics
The roulette-wheel selector is also known as fitness proportional selector, but in the Jenetics library it is implemented as probability selector.
RouletteWheelSelector() - Constructor for class io.jenetics.RouletteWheelSelector
 
RouletteWheelSelector(boolean) - Constructor for class io.jenetics.RouletteWheelSelector
 

S

sameState(DoubleMomentStatistics) - Method in class io.jenetics.stat.DoubleMomentStatistics
Compares the state of two DoubleMomentStatistics objects.
sameState(IntMomentStatistics) - Method in class io.jenetics.stat.IntMomentStatistics
Compares the state of two IntMomentStatistics objects.
sameState(LongMomentStatistics) - Method in class io.jenetics.stat.LongMomentStatistics
Compares the state of two LongMomentStatistics objects.
sameState(MinMax<C>) - Method in class io.jenetics.stat.MinMax
Compares the state of two LongMomentStatistics objects.
sameState(Quantile) - Method in class io.jenetics.stat.Quantile
Compares the state of two Quantile objects.
sampleSize() - Method in class io.jenetics.TournamentSelector
Return the sample size of the tournament selector.
select(Seq<Phenotype<G, C>>, int, Optimize) - Method in class io.jenetics.EliteSelector
 
select(Seq<Phenotype<G, C>>, int, Optimize) - Method in class io.jenetics.MonteCarloSelector
 
select(Seq<Phenotype<G, C>>, int, Optimize) - Method in class io.jenetics.ProbabilitySelector
 
select(Seq<Phenotype<G, C>>, int, Optimize) - Method in interface io.jenetics.Selector
Select phenotypes from the Population.
select(Seq<Phenotype<G, C>>, int, Optimize) - Method in class io.jenetics.TournamentSelector
 
select(Seq<Phenotype<G, C>>, int, Optimize) - Method in class io.jenetics.TruncationSelector
This method sorts the population in descending order while calculating the selection probabilities.
select(Seq<Phenotype<G, N>>, int, Optimize) - Method in class io.jenetics.StochasticUniversalSelector
This method sorts the population in descending order while calculating the selection probabilities.
selectionDuration() - Method in class io.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for selecting the population, in seconds.
selector(Selector<G, C>) - Method in class io.jenetics.engine.Engine.Builder
The selector used for selecting the survivors and offspring population.
selector(Selector<G, C>) - Method in class io.jenetics.engine.EvolutionParams.Builder
The selector used for selecting the survivors and offspring population.
Selector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Interface in io.jenetics
Selectors are responsible for selecting a given number of individuals from the population.
Seq<T> - Interface in io.jenetics.util
General interface for a ordered, fixed sized, object sequence.
serial(Function<? super Genotype<G>, ? extends C>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates the fitness function of the population serially in the main thread.
serial(Function<? super T, ? extends C>, Codec<T, G>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates the fitness function of the population serially in the main thread.
serial(Function<? super T, ? extends C>, Function<? super Genotype<G>, ? extends T>) - Static method in class io.jenetics.engine.Evaluators
Return a new fitness evaluator, which evaluates the fitness function of the population serially in the main thread.
set(int, T) - Method in interface io.jenetics.util.MSeq
Set the value at the given index.
setAll(Iterable<? extends T>) - Method in interface io.jenetics.util.MSeq
Fills the sequence with values of the given iterable.
setAll(Iterator<? extends T>) - Method in interface io.jenetics.util.MSeq
Fills the sequence with values of the given iterator.
setAll(T[]) - Method in interface io.jenetics.util.MSeq
Fill the sequence with the given values.
setup(Engine.Setup<G, C>) - Method in class io.jenetics.engine.Engine.Builder
Applies the given setup recipe to this engine builder.
shortValue() - Method in class io.jenetics.DoubleGene
 
shortValue() - Method in class io.jenetics.IntegerGene
 
shortValue() - Method in class io.jenetics.LongGene
 
shortValue() - Method in interface io.jenetics.NumericChromosome
Return the short value of this NumericChromosome at the index 0.
shortValue() - Method in interface io.jenetics.NumericGene
Returns the value of the specified gene as an short.
shortValue(int) - Method in interface io.jenetics.NumericChromosome
Return the short value of this NumericChromosome at the given index.
shuffle() - Method in interface io.jenetics.util.MSeq
Randomize the array using the Random object currently registered in the RandomRegistry class.
shuffle(Random) - Method in interface io.jenetics.util.MSeq
Randomize the array using the given Random object.
SinglePointCrossover<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
Single point crossover
SinglePointCrossover() - Constructor for class io.jenetics.SinglePointCrossover
Create a new single point crossover object with crossover probability of 0.05.
SinglePointCrossover(double) - Constructor for class io.jenetics.SinglePointCrossover
Constructs an alterer with a given recombination probability.
size() - Method in class io.jenetics.util.IntRange
Return the size of the IntRange: max - min.
size() - Method in interface io.jenetics.util.Seq
 
skewness() - Method in class io.jenetics.stat.DoubleMoments
Return the skewness of values recorded, or Double.NaN if less than two values have been recorded.
skewness() - Method in class io.jenetics.stat.IntMoments
Return the skewness of values recorded, or Double.NaN if less than two values have been recorded.
skewness() - Method in class io.jenetics.stat.LongMoments
Return the skewness of values recorded, or Double.NaN if less than two values have been recorded.
sort() - Method in interface io.jenetics.util.MSeq
Sorts this sequence according to the natural order of the elements.
sort(double[]) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(double[], int, int) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(int) - Method in interface io.jenetics.util.MSeq
Sorts this sequence according to the natural order of the elements.
sort(int[]) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(int[], int, int) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(int, int) - Method in interface io.jenetics.util.MSeq
Sorts this sequence according to the natural order of the elements.
sort(int, int, Comparator<? super T>) - Method in interface io.jenetics.util.MSeq
Sorts this sequence according to the order induced by the specified Comparator.
sort(int, Comparator<? super T>) - Method in interface io.jenetics.util.MSeq
Sorts this sequence according to the order induced by the specified Comparator.
sort(long[]) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(long[], int, int) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(BaseSeq<? extends T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(BaseSeq<? extends T>, int, int) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(BaseSeq<? extends T>, int, int, Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(BaseSeq<? extends T>, Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(Comparator<? super T>) - Method in interface io.jenetics.util.MSeq
Sorts this sequence according to the order induced by the specified Comparator.
sort(List<? extends T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(List<? extends T>, int, int) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(List<? extends T>, int, int, Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(List<? extends T>, Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(T[]) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(T[], int, int) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(T[], int, int, Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(T[], Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(T, int, int, ProxySorter.Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
sort(T, int, ProxySorter.Comparator<? super T>) - Static method in class io.jenetics.util.ProxySorter
Sorting the given array by creating an index lookup array.
spliterator() - Method in interface io.jenetics.util.BaseSeq
 
StochasticUniversalSelector<G extends Gene<?,​G>,​N extends Number & Comparable<? super N>> - Class in io.jenetics
StochasticUniversalSelector is a method for selecting a population according to some given probability in a way that minimize chance fluctuations.
StochasticUniversalSelector() - Constructor for class io.jenetics.StochasticUniversalSelector
 
stream() - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with a newly created population.
stream() - Method in interface io.jenetics.util.BaseSeq
Returns a sequential Stream with this sequence as its source.
stream() - Method in class io.jenetics.util.IntRange
Returns a sequential ordered IntStream from IntRange.min() (inclusive) to IntRange.max() (exclusive) by an incremental step of 1.
stream() - Method in class io.jenetics.util.LongRange
Returns a sequential ordered LongStream from LongRange.min() (inclusive) to LongRange.max() (exclusive) by an incremental step of 1.
stream(EvolutionInit<G>) - Method in class io.jenetics.engine.Engine
 
stream(EvolutionInit<G>) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given initial value.
stream(EvolutionResult<G, C>) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new EvolutionStream starting with a previously evolved EvolutionResult.
stream(EvolutionStart<G, C>) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given evolution start.
stream(ISeq<Phenotype<G, C>>) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given initial population.
stream(ISeq<Phenotype<G, C>>, long) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given initial population.
stream(Iterable<Genotype<G>>) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given initial individuals.
stream(Iterable<Genotype<G>>, long) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given initial individuals.
stream(Supplier<EvolutionStart<G, C>>) - Method in class io.jenetics.engine.Engine
 
stream(Supplier<EvolutionStart<G, C>>) - Method in interface io.jenetics.engine.EvolutionStreamable
Create a new, possibly infinite, evolution stream with the given evolution start.
StreamPublisher<T> - Class in io.jenetics.util
This class allows to create a reactive Flow.Publisher from a given Java Stream.
StreamPublisher() - Constructor for class io.jenetics.util.StreamPublisher
Creates a new publisher using the ForkJoinPool.commonPool() for async delivery to subscribers (unless it does not support a parallelism level of at least two, in which case, a new Thread is created to run each task), with maximum buffer capacity of Flow.defaultBufferSize(), and no handler for Subscriber exceptions in method onNext.
StreamPublisher(Executor, int) - Constructor for class io.jenetics.util.StreamPublisher
Creates a new StreamPublisher using the given Executor for async delivery to subscribers, with the given maximum buffer size for each subscriber, and no handler for Subscriber exceptions in method Flow.Subscriber.onNext(Object).
StreamPublisher(Executor, int, BiConsumer<? super Flow.Subscriber<? super T>, ? super Throwable>) - Constructor for class io.jenetics.util.StreamPublisher
Creates a new StreamPublisher using the given Executor for async delivery to subscribers, with the given maximum buffer size for each subscriber.
Streams - Class in io.jenetics.util
This class contains factory methods for (flat) mapping stream elements.
subSeq(int) - Method in interface io.jenetics.util.ISeq
 
subSeq(int) - Method in interface io.jenetics.util.MSeq
 
subSeq(int) - Method in interface io.jenetics.util.Seq
Returns a view of the portion of this sequence between the specified start, inclusive, and end, exclusive.
subSeq(int, int) - Method in interface io.jenetics.util.ISeq
 
subSeq(int, int) - Method in interface io.jenetics.util.MSeq
 
subSeq(int, int) - Method in interface io.jenetics.util.Seq
Returns a view of the portion of this sequence between the specified start, inclusive, and end, exclusive.
subSequence(int, int) - Method in class io.jenetics.CharacterChromosome
 
subSequence(int, int) - Method in class io.jenetics.util.CharSeq
 
sum() - Method in class io.jenetics.stat.DoubleMoments
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.DoubleMomentStatistics
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.DoubleSummary
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.IntMoments
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.IntMomentStatistics
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.IntSummary
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.LongMoments
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.LongMomentStatistics
Return the sum of values recorded, or zero if no values have been recorded.
sum() - Method in class io.jenetics.stat.LongSummary
Return the sum of values recorded, or zero if no values have been recorded.
sum(double[]) - Static method in class io.jenetics.stat.DoubleSummary
Return the sum of the given double array.
sum(int[]) - Static method in class io.jenetics.stat.IntSummary
Return the sum of the given double array.
sum(long[]) - Static method in class io.jenetics.stat.LongSummary
Return the sum of the given double array.
survivorFilterDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for removing and replacing old and invalid survivor individuals.
survivorsFraction(double) - Method in class io.jenetics.engine.Engine.Builder
The survivors fraction.
survivorsSelectionDuration() - Method in class io.jenetics.engine.EvolutionDurations
Return the duration needed for selecting the survivors population.
survivorsSelector() - Method in class io.jenetics.engine.Engine.Builder
Return the used survivor Selector of the GA.
survivorsSelector() - Method in class io.jenetics.engine.Engine
Return the used survivor Selector of the GA.
survivorsSelector() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the used survivor Selector of the GA.
survivorsSelector() - Method in class io.jenetics.engine.EvolutionParams
Return the used survivor Selector of the GA.
survivorsSelector(Selector<G, C>) - Method in class io.jenetics.engine.Engine.Builder
The selector used for selecting the survivors population.
survivorsSelector(Selector<G, C>) - Method in class io.jenetics.engine.EvolutionParams.Builder
The selector used for selecting the survivors population.
survivorsSize() - Method in class io.jenetics.engine.Engine
The number of selected survivors.
survivorsSize() - Method in class io.jenetics.engine.EvolutionParams.Builder
Return the number of survivors.
survivorsSize() - Method in class io.jenetics.engine.EvolutionParams
Return the number of survivors.
survivorsSize(int) - Method in class io.jenetics.engine.Engine.Builder
The number of survivors.
swap(int, int) - Method in interface io.jenetics.util.MSeq
Swap the elements at the two positions.
swap(int, int, MSeq<T>, int) - Method in interface io.jenetics.util.MSeq
Swap a given range with a range of the same size with another array.
swap(int, MSeq<T>) - Method in interface io.jenetics.util.MSeq
Swap the elements at the same position.
SwapMutator<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
The SwapMutation changes the order of genes in a chromosome, with the hope of bringing related genes closer together, thereby facilitating the production of building blocks.
SwapMutator() - Constructor for class io.jenetics.SwapMutator
Default constructor, with default mutation probability (Alterer.DEFAULT_ALTER_PROBABILITY).
SwapMutator(double) - Constructor for class io.jenetics.SwapMutator
Constructs an alterer with a given recombination probability.
swapProbability() - Method in class io.jenetics.UniformCrossover
Return the probability for swapping genes of a chromosome.
synced() - Method in interface io.jenetics.util.Accumulator
Returns a synchronized (thread-safe) accumulator backed by this accumulator.
synced(Object) - Method in interface io.jenetics.util.Accumulator
Returns a synchronized (thread-safe) accumulator backed by this accumulator.
system(ZoneId) - Static method in class io.jenetics.util.NanoClock
This clock is based on the nano system clock.
systemDefaultZone() - Static method in class io.jenetics.util.NanoClock
This clock is based on the nano system clock.
systemUTC() - Static method in class io.jenetics.util.NanoClock
This clock is based on the nano system clock.

T

test(Phenotype<G, C>) - Method in interface io.jenetics.engine.Constraint
Checks the validity of the given individual.
test(Phenotype<G, C>) - Method in class io.jenetics.engine.RetryConstraint
 
toArray() - Method in class io.jenetics.CharacterChromosome
Returns an char array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class io.jenetics.DoubleChromosome
Returns an double array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class io.jenetics.IntegerChromosome
Returns an int array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class io.jenetics.LongChromosome
Returns an long array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in interface io.jenetics.util.Seq
Return an array containing all of the elements in this sequence in right order.
toArray(char[]) - Method in class io.jenetics.CharacterChromosome
Returns an char array containing all of the elements in this chromosome in proper sequence.
toArray(double[]) - Method in class io.jenetics.DoubleChromosome
Returns an double array containing all of the elements in this chromosome in proper sequence.
toArray(int[]) - Method in class io.jenetics.IntegerChromosome
Returns an int array containing all of the elements in this chromosome in proper sequence.
toArray(long[]) - Method in class io.jenetics.LongChromosome
Returns an long array containing all of the elements in this chromosome in proper sequence.
toArray(B[]) - Method in interface io.jenetics.util.Seq
Return an array containing all of the elements in this sequence in right order; the runtime type of the returned array is that of the specified array.
toArray(IntFunction<B[]>) - Method in interface io.jenetics.util.Seq
Returns an array containing the elements of this sequence, using the provided generator function to allocate the returned array.
toBestEvolutionResult() - Static method in class io.jenetics.engine.EvolutionResult
Return a collector which collects the best result of an evolution stream.
toBestGenotype() - Static method in class io.jenetics.engine.EvolutionResult
Return a collector which collects the best genotype of an evolution stream.
toBestPhenotype() - Static method in class io.jenetics.engine.EvolutionResult
Return a collector which collects the best phenotype of an evolution stream.
toBestResult(Codec<T, G>) - Static method in class io.jenetics.engine.EvolutionResult
Return a collector which collects the best result (in the native problem space).
toBestResult(Function<Genotype<G>, T>) - Static method in class io.jenetics.engine.EvolutionResult
Return a collector which collects the best result (in the native problem space).
toBigInteger() - Method in class io.jenetics.BitChromosome
Return the BigInteger value this BitChromosome represents.
toBitSet() - Method in class io.jenetics.BitChromosome
Return the corresponding BitSet of this BitChromosome.
toBuilder() - Method in class io.jenetics.engine.Engine
Create a new evolution Engine.Builder initialized with the values of the current evolution Engine.
toBuilder() - Method in class io.jenetics.engine.EvolutionParams
Return a new builder object, initialized with this parameters.
toByteArray() - Method in class io.jenetics.BitChromosome
 
toByteArray(byte[]) - Method in class io.jenetics.BitChromosome
Returns the two's-complement binary representation of this large integer.
toByteArray(Object) - Method in class io.jenetics.util.IO
Serializes the given object to a byte[] array.
toCanonicalString() - Method in class io.jenetics.BitChromosome
Return the BitChromosome as String.
toCharSeq() - Static method in class io.jenetics.util.CharSeq
 
toDoubleMoments() - Static method in class io.jenetics.stat.DoubleMoments
Return a Collector which returns moments-statistics for the resulting values.
toDoubleMoments() - Method in class io.jenetics.stat.DoubleMomentStatistics
Return a DoubleMoments object from the current statistics,
toDoubleMoments(ToDoubleFunction<? super T>) - Static method in class io.jenetics.stat.DoubleMoments
Return a Collector which applies an double-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toDoubleMomentStatistics(ToDoubleFunction<? super T>) - Static method in class io.jenetics.stat.DoubleMomentStatistics
Return a Collector which applies an double-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toDoubleSummary(ToDoubleFunction<? super T>) - Static method in class io.jenetics.stat.DoubleSummary
Return a Collector which applies an double-producing mapping function to each input element, and returns summary-statistics for the resulting values.
toEvolutionStart() - Method in class io.jenetics.engine.EvolutionResult
Return the current evolution result object as an EvolutionStart object with the current population and current total generation.
toIntervalBest(Comparator<? super C>, int) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the minimal value of the last n elements.
toIntervalBest(Comparator<? super C>, Duration) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the minimal value of the elements emitted within the given timespan.
toIntervalBest(Comparator<? super C>, Duration, Clock) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the minimal value of the elements emitted within the given timespan.
toIntervalMax(int) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the maximal value of the last n elements.
toIntervalMax(Duration) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the maximal value of the elements emitted within the given timespan.
toIntervalMax(Duration, Clock) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the maximal value of the elements emitted within the given timespan.
toIntervalMin(int) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the minimal value of the last n elements.
toIntervalMin(Duration) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the minimal value of the elements emitted within the given timespan.
toIntervalMin(Duration, Clock) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function which returns (emits) the minimal value of the elements emitted within the given timespan.
toIntMoments() - Static method in class io.jenetics.stat.IntMoments
Return a Collector which returns moments-statistics for the resulting values.
toIntMoments() - Method in class io.jenetics.stat.IntMomentStatistics
Return an IntMoments object from the current statistics,
toIntMoments(ToIntFunction<? super T>) - Static method in class io.jenetics.stat.IntMoments
Return a Collector which applies an int-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toIntMomentStatistics(ToIntFunction<? super T>) - Static method in class io.jenetics.stat.IntMomentStatistics
Return a Collector which applies an int-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toIntSummary(ToIntFunction<? super T>) - Static method in class io.jenetics.stat.IntSummary
Return a Collector which applies an int-producing mapping function to each input element, and returns summary-statistics for the resulting values.
toInvertibleCodec(Function<? super T, Genotype<G>>) - Method in interface io.jenetics.engine.Codec
Converts this codec into an invertible codec, by using the given encoder (inversion) function.
toISeq() - Static method in interface io.jenetics.util.ISeq
Returns a Collector that accumulates the input elements into a new ISeq.
toISeq() - Method in interface io.jenetics.util.MSeq
Return a read-only projection of this sequence.
toISeq(int) - Static method in interface io.jenetics.util.ISeq
Returns a Collector that accumulates the last n input elements into a new ISeq.
toISeq(CharSequence) - Static method in class io.jenetics.util.CharSeq
Helper method for creating a sequence of characters from the given CharSequence.
toLongMoments() - Static method in class io.jenetics.stat.LongMoments
Return a Collector which returns moments-statistics for the resulting values.
toLongMoments() - Method in class io.jenetics.stat.LongMomentStatistics
Return a LongMoments object from the current statistics,
toLongMoments(ToLongFunction<? super T>) - Static method in class io.jenetics.stat.LongMoments
Return a Collector which applies an long-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toLongMomentStatistics(ToLongFunction<? super T>) - Static method in class io.jenetics.stat.LongMomentStatistics
Return a Collector which applies an long-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toLongSummary(ToLongFunction<? super T>) - Static method in class io.jenetics.stat.LongSummary
Return a Collector which applies an long-producing mapping function to each input element, and returns summary-statistics for the resulting values.
toMedian(ToDoubleFunction<? super T>) - Static method in class io.jenetics.stat.Quantile
Return a Collector which applies an double-producing mapping function to each input element, and returns the median for the resulting values.
toMinMax() - Static method in class io.jenetics.stat.MinMax
Return a Collector which calculates the minimum and maximum value.
toMinMax(Comparator<? super T>) - Static method in class io.jenetics.stat.MinMax
Return a Collector which calculates the minimum and maximum value.
toMSeq() - Static method in interface io.jenetics.util.MSeq
Returns a Collector that accumulates the input elements into a new MSeq.
toQuantile(double, ToDoubleFunction<? super T>) - Static method in class io.jenetics.stat.Quantile
Return a Collector which applies an double-producing mapping function to each input element, and returns quantiles for the resulting values.
toSeq() - Static method in interface io.jenetics.util.Seq
Returns a Collector that accumulates the input elements into a new Seq.
toSeq(int) - Static method in interface io.jenetics.util.Seq
Returns a Collector that accumulates the last n input elements into a new Seq.
toStrictlyDecreasing() - Static method in class io.jenetics.stat.MinMax
Return a new flat-mapper function, which guarantees a strictly decreasing stream, from an arbitrarily ordered source stream.
toStrictlyDecreasing() - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function, which guarantees a strictly decreasing stream, from an arbitrarily ordered source stream.
toStrictlyImproving(Comparator<? super T>) - Static method in class io.jenetics.stat.MinMax
Return a new flat-mapper function, which guarantees a strictly improving stream, from an arbitrarily ordered source stream.
toStrictlyImproving(Comparator<? super T>) - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function, which guarantees a strictly improving stream, from an arbitrarily ordered source stream.
toStrictlyIncreasing() - Static method in class io.jenetics.stat.MinMax
Return a new flat-mapper function, which guarantees a strictly increasing stream, from an arbitrarily ordered source stream.
toStrictlyIncreasing() - Static method in class io.jenetics.util.Streams
Return a new flat-mapper function, which guarantees a strictly increasing stream, from an arbitrarily ordered source stream.
toString() - Method in class io.jenetics.AbstractChromosome
 
toString() - Method in class io.jenetics.AltererResult
 
toString() - Method in class io.jenetics.AnyGene
 
toString() - Method in class io.jenetics.BitChromosome
 
toString() - Method in enum io.jenetics.BitGene
 
toString() - Method in class io.jenetics.BoltzmannSelector
 
toString() - Method in class io.jenetics.CharacterChromosome
 
toString() - Method in class io.jenetics.CharacterGene
 
toString() - Method in class io.jenetics.CombineAlterer
 
toString() - Method in class io.jenetics.DoubleGene
 
toString() - Method in class io.jenetics.EliteSelector
 
toString() - Method in class io.jenetics.engine.EvolutionInit
 
toString() - Method in class io.jenetics.engine.EvolutionStart
 
toString() - Method in class io.jenetics.engine.EvolutionStatistics
 
toString() - Method in class io.jenetics.EnumGene
 
toString() - Method in class io.jenetics.ExponentialRankSelector
 
toString() - Method in class io.jenetics.GaussianMutator
 
toString() - Method in class io.jenetics.Genotype
 
toString() - Method in class io.jenetics.IntegerGene
 
toString() - Method in class io.jenetics.IntermediateCrossover
 
toString() - Method in class io.jenetics.LinearRankSelector
 
toString() - Method in class io.jenetics.LineCrossover
 
toString() - Method in class io.jenetics.LongGene
 
toString() - Method in class io.jenetics.MonteCarloSelector
 
toString() - Method in class io.jenetics.MultiPointCrossover
 
toString() - Method in class io.jenetics.Mutator
 
toString() - Method in class io.jenetics.MutatorResult
 
toString() - Method in class io.jenetics.PartiallyMatchedCrossover
 
toString() - Method in class io.jenetics.PermutationChromosome
 
toString() - Method in class io.jenetics.Phenotype
 
toString() - Method in class io.jenetics.RouletteWheelSelector
 
toString() - Method in class io.jenetics.SinglePointCrossover
 
toString() - Method in class io.jenetics.stat.DoubleMoments
 
toString() - Method in class io.jenetics.stat.DoubleMomentStatistics
 
toString() - Method in class io.jenetics.stat.DoubleSummary
 
toString() - Method in class io.jenetics.stat.IntMoments
 
toString() - Method in class io.jenetics.stat.IntMomentStatistics
 
toString() - Method in class io.jenetics.stat.IntSummary
 
toString() - Method in class io.jenetics.stat.LongMoments
 
toString() - Method in class io.jenetics.stat.LongMomentStatistics
 
toString() - Method in class io.jenetics.stat.LongSummary
 
toString() - Method in class io.jenetics.stat.MinMax
 
toString() - Method in class io.jenetics.stat.Quantile
 
toString() - Method in class io.jenetics.StochasticUniversalSelector
 
toString() - Method in class io.jenetics.TournamentSelector
 
toString() - Method in class io.jenetics.TruncationSelector
 
toString() - Method in class io.jenetics.util.CharSeq
 
toString() - Method in class io.jenetics.util.DoubleRange
 
toString() - Method in class io.jenetics.util.IntRange
 
toString() - Method in class io.jenetics.util.LongRange
 
toString() - Method in class io.jenetics.util.NanoClock
 
toString(String) - Method in interface io.jenetics.util.Seq
Create a string representation of the given sequence.
toString(String, String, String) - Method in interface io.jenetics.util.Seq
Create a string representation of the given sequence.
totalGenerations() - Method in class io.jenetics.engine.EvolutionResult
Return the generation count evaluated so far.
toUniquePopulation() - Static method in class io.jenetics.engine.EvolutionResult
Return a mapping function, which removes duplicate individuals from the population and replaces it with newly created one by the existing genotype factory.
toUniquePopulation(int) - Static method in class io.jenetics.engine.EvolutionResult
Return a mapping function, which removes duplicate individuals from the population and replaces it with newly created one by the existing genotype factory.
toUniquePopulation(Factory<Genotype<G>>) - Static method in class io.jenetics.engine.EvolutionResult
Return a mapping function, which removes duplicate individuals from the population and replaces it with newly created one by the given genotype factory.
toUniquePopulation(Factory<Genotype<G>>, int) - Static method in class io.jenetics.engine.EvolutionResult
Return a mapping function, which removes duplicate individuals from the population and replaces it with newly created one by the given genotype factory.
TournamentSelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
In tournament selection the best individual from a random sample of s individuals is chosen from the population Pg.
TournamentSelector() - Constructor for class io.jenetics.TournamentSelector
Create a tournament selector with sample size two.
TournamentSelector(int) - Constructor for class io.jenetics.TournamentSelector
Create a tournament selector with the give sample size.
TournamentSelector(Comparator<? super Phenotype<G, C>>, int) - Constructor for class io.jenetics.TournamentSelector
Create a tournament selector with the give comparator and sample size.
TRUE - io.jenetics.BitGene
 
TruncationSelector<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
In truncation selection individuals are sorted according to their fitness.
TruncationSelector() - Constructor for class io.jenetics.TruncationSelector
Create a new TruncationSelector object.
TruncationSelector(int) - Constructor for class io.jenetics.TruncationSelector
Create a new TruncationSelector object, where the worst selected individual has rank n.

U

UniformCrossover<G extends Gene<?,​G>,​C extends Comparable<? super C>> - Class in io.jenetics
The uniform crossover uses swaps single genes between two chromosomes, instead of whole ranges as in single- and multi-point crossover.
UniformCrossover() - Constructor for class io.jenetics.UniformCrossover
Create a new universal crossover instance.
UniformCrossover(double) - Constructor for class io.jenetics.UniformCrossover
Create a new universal crossover instance.
UniformCrossover(double, double) - Constructor for class io.jenetics.UniformCrossover
Create a new universal crossover instance.
upcast(ISeq<B>) - Static method in interface io.jenetics.util.ISeq
Allows a safe (without compile warning) upcast from B to A.
using(ThreadLocal<R>, Consumer<? super R>) - Static method in class io.jenetics.util.RandomRegistry
Executes the consumer code using the given random engine.
using(R, Consumer<? super R>) - Static method in class io.jenetics.util.RandomRegistry
Executes the consumer code using the given random engine.

V

validAlleles() - Method in class io.jenetics.EnumGene
Return sequence of the valid alleles where this gene is a part of.
validAlleles() - Method in class io.jenetics.PermutationChromosome
Return the sequence of valid alleles of this chromosome.
validChars() - Method in class io.jenetics.CharacterGene
Return a (unmodifiable) set of valid characters.
value() - Method in class io.jenetics.stat.Quantile
Return the computed quantile value.
valueOf(String) - Static method in enum io.jenetics.BitGene
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum io.jenetics.Optimize
Returns the enum constant of this type with the specified name.
values() - Static method in enum io.jenetics.BitGene
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum io.jenetics.Optimize
Returns an array containing the constants of this enum type, in the order they are declared.
variance() - Method in class io.jenetics.stat.DoubleMoments
Return the variance of values recorded, or Double.NaN if no values have been recorded.
variance() - Method in class io.jenetics.stat.IntMoments
Return the variance of values recorded, or Double.NaN if no values have been recorded.
variance() - Method in class io.jenetics.stat.LongMoments
Return the variance of values recorded, or Double.NaN if no values have been recorded.
Verifiable - Interface in io.jenetics.util
 
viewOf(BaseSeq<? extends T>) - Static method in interface io.jenetics.util.Seq
Returns a sequence backed by the specified seq.
viewOf(List<? extends T>) - Static method in interface io.jenetics.util.Seq
Returns a sequence backed by the specified list.
viewOf(T[]) - Static method in interface io.jenetics.util.Seq
Returns a fixed-size sequence backed by the specified array.

W

with(ThreadLocal<R>, Function<? super R, ? extends T>) - Static method in class io.jenetics.util.RandomRegistry
Opens a new Scope with the given random engine and executes the given function within it.
with(R, Function<? super R, ? extends T>) - Static method in class io.jenetics.util.RandomRegistry
Opens a new Scope with the given random engine and executes the given function within it.
withFitness(C) - Method in class io.jenetics.Phenotype
Return a new Phenotype object with the given raw fitness value.
withGeneration(long) - Method in class io.jenetics.Phenotype
Return a new Phenotype object with the given generation.
withZone(ZoneId) - Method in class io.jenetics.util.NanoClock
 
worst() - Method in enum io.jenetics.Optimize
Return a null-friendly function which returns the worst element of two values.
worst(C, C) - Method in enum io.jenetics.Optimize
Return the worst value, according to this optimization direction.
worstFitness() - Method in class io.jenetics.engine.EvolutionResult
Return the worst population fitness.
worstPhenotype() - Method in class io.jenetics.engine.EvolutionResult
Return the worst Phenotype of the result population.
write(Object, File) - Method in class io.jenetics.util.IO
Write the (serializable) object to the given file.
write(Object, OutputStream) - Method in class io.jenetics.util.IO
Write the (serializable) object to the given output stream.
write(Object, String) - Method in class io.jenetics.util.IO
Write the (serializable) object to the given path.
write(Object, Path) - Method in class io.jenetics.util.IO
Write the (serializable) object to the given path.

Z

ZERO - Static variable in enum io.jenetics.BitGene
 
ZERO - Static variable in class io.jenetics.engine.EvolutionDurations
Constant for zero evolution durations.
zeros() - Method in class io.jenetics.BitChromosome
Return the indexes of the zeros of this bit-chromosome as stream.

_

_genes - Variable in class io.jenetics.AbstractChromosome
Array of genes which forms the chromosome.
_genes - Variable in class io.jenetics.BitChromosome
The boolean array which holds the BitGenes.
_length - Variable in class io.jenetics.BitChromosome
The length of the chromosomes (number of bits).
_p - Variable in class io.jenetics.BitChromosome
The ones probability of the randomly generated Chromosome.
_probability - Variable in class io.jenetics.AbstractAlterer
The altering probability.
_reverter - Variable in class io.jenetics.ProbabilitySelector
 
_sorted - Variable in class io.jenetics.ProbabilitySelector
 
_valid - Variable in class io.jenetics.AbstractChromosome
Indicates whether this chromosome is valid or not.
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