java.lang.Object
- io.jenetics.xml.Writers.Genotypes

Enclosing class:: Writers

public static final class Writers.Genotypes
extends Object

This class contains static writer methods for Genotype objects.

Writer code

 final Genotype<DoubleGene> gt = Genotype.of(
     DoubleChromosome.of(0.0, 1.0, 3),
     DoubleChromosome.of(0.0, 1.0, 2)
 );

 final Writer<Collection<Genotype<DoubleGene>>> writer =
     Writers.Genotypes.writer(Writers.DoubleChromosome.writer());

 try (AutoCloseableXMLStreamWriter xml = XML.writer(System.out, "    ")) {
     writer.write(asList(value), xml);
 }

 
 <genotypes length="1">
     <genotype length="2" ngenes="5">
         <double-chromosome length="3">
             <min>0.0</min>
             <max>1.0</max>
             <alleles>
                 <allele>0.27251556008507416</allele>
                 <allele>0.003140816229067145</allele>
                 <allele>0.43947528327497376</allele>
             </alleles>
         </double-chromosome>
         <double-chromosome length="2">
             <min>0.0</min>
             <max>1.0</max>
             <alleles>
                 <allele>0.4026521545744768</allele>
                 <allele>0.36137605952663554</allele>
             <alleles>
         </double-chromosome>
     </genotype>
 </genotypes>

Method Summary

All Methods Static Methods Concrete Methods
Modifier and Type	Method	Description
`static <A,G extends Gene<A,G>,C extends Chromosome<G>> void`	`write(OutputStream out, Collection<Genotype<G>> data, Writer<? super C> chromosomeWriter)`	Write the given `Genotype` to the given output stream.
`static <A,G extends Gene<A,G>,C extends Chromosome<G>> void`	`write(OutputStream out, Collection<Genotype<G>> data, String indent, Writer<? super C> chromosomeWriter)`	Write the given `Genotype` to the given output stream.
`static <A,G extends Gene<A,G>,C extends Chromosome<G>> Writer<Collection<Genotype<G>>>`	`writer(Writer<? super C> writer)`	Create a writer for genotypes of arbitrary chromosomes.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

writer
```
public static <A,G extends Gene<A,G>,C extends Chromosome<G>> Writer<Collection<Genotype<G>>> writer(Writer<? super C> writer)
```
Create a writer for genotypes of arbitrary chromosomes. How to write the genotypes chromosomes is defined by the given Writer. The following writer allows to write double-gene chromosomes:
final Writer<Collection<Genotype<DoubleGene>>> writer = Writers.Genotypes.writer(Writers.DoubleChromosome.writer());

Type Parameters:

A - the allele type

G - the gene type

C - the chromosome type

Parameters:

writer - the chromosome writer

Returns:

a new genotype writer

Throws:

NullPointerException - if the given chromosome writer is null

write

public static <A,G extends Gene<A,G>,C extends Chromosome<G>> void write(OutputStream out,
                                                                                           Collection<Genotype<G>> data,
                                                                                           String indent,
                                                                                           Writer<? super C> chromosomeWriter)
                                                                                    throws XMLStreamException

Write the given Genotype to the given output stream.

Type Parameters:: A - the allele type; G - the gene type; C - the chromosome type
Parameters:: out - the target output stream; data - the genotypes to write; indent - the XML level indentation; chromosomeWriter - the chromosome writer used to write the genotypes
Throws:: XMLStreamException - if an error occurs while writing the chromosome; NullPointerException - if the one of the arguments is null

write

public static <A,G extends Gene<A,G>,C extends Chromosome<G>> void write(OutputStream out,
                                                                                           Collection<Genotype<G>> data,
                                                                                           Writer<? super C> chromosomeWriter)
                                                                                    throws XMLStreamException

Write the given Genotype to the given output stream.

Type Parameters:: A - the allele type; G - the gene type; C - the chromosome type
Parameters:: out - the target output stream; data - the genotypes to write; chromosomeWriter - the chromosome writer used to write the genotypes
Throws:: XMLStreamException - if an error occurs while writing the chromosome; NullPointerException - if the one of the arguments is null

Class Writers.Genotypes

Method Summary

Methods inherited from class java.lang.Object

Method Detail

writer

write

write