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A

a - Variable in class org.jenetics.util.LCG64ShiftRandom.Param
The parameter a of the LC recursion.
AbstractAlterer<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
Abstract implementation of the alterer interface.
AbstractAlterer(double) - Constructor for class org.jenetics.AbstractAlterer
Constructs an alterer with a given recombination probability.
AbstractChromosome<G extends Gene<?,G>> - Class in org.jenetics
The abstract base implementation of the Chromosome interface.
AbstractChromosome(ISeq<? extends G>) - Constructor for class org.jenetics.AbstractChromosome
Create a new AbstractChromosome from the given genes array.
accept(EvolutionResult<?, C>) - Method in class org.jenetics.engine.EvolutionStatistics
 
accept(double) - Method in class org.jenetics.stat.DoubleMomentStatistics
Records a new value into the moments information
accept(int) - Method in class org.jenetics.stat.IntMomentStatistics
Records a new value into the moments information
accept(long) - Method in class org.jenetics.stat.LongMomentStatistics
Records a new value into the moments information
accept(int) - Method in class org.jenetics.stat.LongMomentStatistics
Records a new value into the moments information
accept(C) - Method in class org.jenetics.stat.MinMax
Accept the element for min-max calculation.
accept(double) - Method in class org.jenetics.stat.Quantile
 
add(Phenotype<G, C>) - Method in class org.jenetics.Population
Add Phenotype to the Population.
add(int, Phenotype<G, C>) - Method in class org.jenetics.Population
Add Phenotype to the Population.
addAll(Collection<? extends Phenotype<G, C>>) - Method in class org.jenetics.Population
 
addAll(int, Collection<? extends Phenotype<G, C>>) - Method in class org.jenetics.Population
 
alter(Population<G, C>, long) - Method in interface org.jenetics.Alterer
Alters (recombine) a given population.
alter(Population<G, C>, long) - Method in class org.jenetics.Mutator
Concrete implementation of the alter method.
alter(Population<G, C>, long) - Method in class org.jenetics.Recombinator
 
Alterer<G extends Gene<?,G>,C extends Comparable<? super C>> - Interface in org.jenetics
The Alterer is responsible for the changing/recombining the Population.
alterers(Alterer<G, C>, Alterer<G, C>...) - Method in class org.jenetics.engine.Engine.Builder
The alterers used for alter the offspring population.
andThen(Alterer<G, C>) - Method in interface org.jenetics.Alterer
Returns a composed alterer that applies the this alterer to its input, and then applies the after alterer to the result.
AnyChromosome<A> - Class in org.jenetics
Chromosome implementation, which allows to create genes without explicit implementing the Chromosome interface.
AnyChromosome(ISeq<AnyGene<A>>, Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<? super A>>) - Constructor for class org.jenetics.AnyChromosome
Create a new AnyChromosome from the given genes array.
AnyGene<A> - Class in org.jenetics
Gene implementation, which allows to create genes without explicit implementing the Gene interface.
append(T...) - Method in interface org.jenetics.util.ISeq
 
append(Iterable<? extends T>) - Method in interface org.jenetics.util.ISeq
 
append(T...) - Method in interface org.jenetics.util.MSeq
 
append(Iterable<? extends T>) - Method in interface org.jenetics.util.MSeq
 
append(T...) - Method in interface org.jenetics.util.Seq
Return a new Seq with the given values appended.
append(Iterable<? extends T>) - Method in interface org.jenetics.util.Seq
Return a new Seq with the given values appended.
apply(EvolutionStart<G, C>) - Method in class org.jenetics.engine.Engine
This method is an alias for the Engine.evolve(EvolutionStart) method.
apply(Double) - Method in class org.jenetics.ExponentialScaler
 
as(Class<C>) - Method in interface org.jenetics.Chromosome
Casts this Chromosome to an instance of type C.
ascending() - Method in enum org.jenetics.Optimize
Create an appropriate comparator of the given optimization strategy.
asISeq() - Method in interface org.jenetics.util.Seq
Return this sequence as ISeq instance.
asList() - Method in interface org.jenetics.util.MSeq
 
asList() - Method in interface org.jenetics.util.Seq
Returns a fixed-size list backed by the specified sequence.
asMSeq() - Method in interface org.jenetics.util.Seq
Return this sequence as MSeq instance.

B

b - Variable in class org.jenetics.util.LCG64ShiftRandom.Param
The parameter b of the LC recursion.
best(C, C) - Method in enum org.jenetics.Optimize
Return the best value, according to this optimization direction.
BitChromosome - Class in org.jenetics
Implementation of the classical BitChromosome.
BitChromosome(byte[], int, int) - Constructor for class org.jenetics.BitChromosome
Create a new bit chromosome from the given bit (byte) array.
BitChromosome(byte[]) - Constructor for class org.jenetics.BitChromosome
Create a new BitChromosome from the given byte array.
bitCount() - Method in class org.jenetics.BitChromosome
Returns the number of bits set to true in this BitChromosome.
BitGene - Enum in org.jenetics
Implementation of a BitGene.
BoltzmannSelector<G extends Gene<?,G>,N extends Number & Comparable<? super N>> - Class in org.jenetics
In this Selector, the probability for selection is defined as.
BoltzmannSelector(double) - Constructor for class org.jenetics.BoltzmannSelector
Create a new BoltzmannSelector with the given b value.
BoltzmannSelector() - Constructor for class org.jenetics.BoltzmannSelector
Create a new BoltzmannSelector with a default beta of 4.0.
booleanValue() - Method in enum org.jenetics.BitGene
Return the boolean value of this gene.
BoundedChromosome<A extends Comparable<? super A>,G extends BoundedGene<A,G>> - Interface in org.jenetics
Chromosome interface for BoundedGenes.
BoundedGene<A extends Comparable<? super A>,G extends BoundedGene<A,G>> - Interface in org.jenetics
Base interface for genes where the alleles are bound by a minimum and a maximum value.
build() - Method in class org.jenetics.engine.Engine.Builder
Builds an new Engine instance from the set properties.
builder() - Method in class org.jenetics.engine.Engine
Create a new evolution Engine.Builder initialized with the values of the current evolution Engine.
builder(Problem<T, G, C>) - Static method in class org.jenetics.engine.Engine
Create a new evolution Engine.Builder for the given Problem.
builder(Function<? super Genotype<G>, ? extends C>, Factory<Genotype<G>>) - Static method in class org.jenetics.engine.Engine
Create a new evolution Engine.Builder with the given fitness function and genotype factory.
builder(Function<? super Genotype<G>, ? extends C>, Chromosome<G>, Chromosome<G>...) - Static method in class org.jenetics.engine.Engine
Create a new evolution Engine.Builder with the given fitness function and chromosome templates.
builder(Function<? super T, ? extends C>, Codec<T, G>) - Static method in class org.jenetics.engine.Engine
Create a new evolution Engine.Builder with the given fitness function and problem codec.
byExecutionTime(Duration, Clock) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncate the evolution stream if the GA execution exceeds a given time duration.
byExecutionTime(Duration) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncate the evolution stream if the GA execution exceeds a given time duration.
byFitnessConvergence(int, int, BiPredicate<DoubleMoments, DoubleMoments>) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncate the evolution stream if the fitness is converging.
byFitnessConvergence(int, int, double) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncate the evolution stream if the fitness is converging.
byFitnessThreshold(C) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncated the evolution stream if the best fitness of the current population becomes less than the specified threshold and the objective is set to minimize the fitness.
byFixedGeneration(long) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncate the evolution stream after the given number of generations.
bySteadyFitness(int) - Static method in class org.jenetics.engine.limit
Return a predicate, which will truncate the evolution stream if no better phenotype could be found after the given number of generations.
byteValue(int) - Method in interface org.jenetics.NumericChromosome
Return the byte value of this NumericChromosome at the given index.
byteValue() - Method in interface org.jenetics.NumericChromosome
Return the byte value of this NumericChromosome at the index 0.
byteValue() - Method in interface org.jenetics.NumericGene
Returns the value of the specified gene as an byte.

C

CharacterChromosome - Class in org.jenetics
CharacterChromosome which represents character sequences.
CharacterChromosome(ISeq<CharacterGene>) - Constructor for class org.jenetics.CharacterChromosome
Create a new chromosome from the given genes array.
CharacterChromosome(CharSeq, int) - Constructor for class org.jenetics.CharacterChromosome
Create a new chromosome with the validCharacters char set as valid characters.
CharacterGene - Class in org.jenetics
Character gene implementation.
charAt(int) - Method in class org.jenetics.CharacterChromosome
 
charAt(int) - Method in class org.jenetics.util.CharSeq
 
CharSeq - Class in org.jenetics.util
This class is used for holding the valid characters of an CharacterGene.
CharSeq(char[]) - Constructor for class org.jenetics.util.CharSeq
Create a new (distinct) CharSeq from the given characters.
CharSeq(CharSequence) - Constructor for class org.jenetics.util.CharSeq
Create a new (distinct) CharSeq from the given characters.
charValue() - Method in class org.jenetics.CharacterGene
Return the char value of this character gene.
Chromosome<G extends Gene<?,G>> - Interface in org.jenetics
A chromosome consists of one or more genes.
clear() - Method in class org.jenetics.Population
 
clock(Clock) - Method in class org.jenetics.engine.Engine.Builder
The clock used for calculating the execution durations.
Codec<T,G extends Gene<?,G>> - Interface in org.jenetics.engine
A problem Codec contains the information about how to encode a given argument type into a Genotype.
codec() - Method in interface org.jenetics.engine.Problem
Return the codec, which translates the types of the problem domain into types, which can be understand by the evolution Engine.
codecs - Class in org.jenetics.engine
This class contains factory methods for creating common problem encodings.
combine(DoubleMomentStatistics) - Method in class org.jenetics.stat.DoubleMomentStatistics
Combine two DoubleMoments statistic objects.
combine(IntMomentStatistics) - Method in class org.jenetics.stat.IntMomentStatistics
Combine two IntMoments statistic objects.
combine(LongMomentStatistics) - Method in class org.jenetics.stat.LongMomentStatistics
Combine two LongMoments statistic objects.
combine(MinMax<C>) - Method in class org.jenetics.stat.MinMax
Combine two MinMax objects.
combine(Quantile) - Method in class org.jenetics.stat.Quantile
Combine two Quantile objects.
compare(T, T) - Method in enum org.jenetics.Optimize
Compares two comparable objects.
compareTo(BitChromosome) - Method in class org.jenetics.BitChromosome
 
compareTo(G) - Method in interface org.jenetics.BoundedGene
 
compareTo(CharacterGene) - Method in class org.jenetics.CharacterGene
 
compareTo(DoubleGene) - Method in class org.jenetics.DoubleGene
 
compareTo(EvolutionDurations) - Method in class org.jenetics.engine.EvolutionDurations
Compares two durations objects.
compareTo(EvolutionResult<G, C>) - Method in class org.jenetics.engine.EvolutionResult
Compare this evolution result with another one, according the populations best individual.
compareTo(EnumGene<A>) - Method in class org.jenetics.EnumGene
 
compareTo(IntegerGene) - Method in class org.jenetics.IntegerGene
 
compareTo(LongGene) - Method in class org.jenetics.LongGene
 
compareTo(Phenotype<G, C>) - Method in class org.jenetics.Phenotype
 
compareTo(CharSeq) - Method in class org.jenetics.util.CharSeq
 
compose(Alterer<G, C>) - Method in interface org.jenetics.Alterer
Returns a composed alterer that first applies the before alterer to its input, and then applies this alterer to the result.
contains(Object) - Method in class org.jenetics.Population
 
contains(Object) - Method in class org.jenetics.util.CharSeq
 
contains(Character) - Method in class org.jenetics.util.CharSeq
Test whether this character set contains the given character c.
contains(char) - Method in class org.jenetics.util.CharSeq
Test whether this character set contains the given character c.
contains(Class<?>) - Static method in class org.jenetics.util.IO.JAXB
Check is the given class is already registered.
contains(Object) - Method in interface org.jenetics.util.Seq
Returns true if this sequence contains the specified element.
containsAll(Collection<?>) - Method in class org.jenetics.Population
 
copy() - Method in class org.jenetics.engine.Engine.Builder
Create a new builder, with the current configuration.
copy() - Method in class org.jenetics.Population
 
copy() - Method in interface org.jenetics.util.Copyable
Return a new copy of type T.
copy() - Method in interface org.jenetics.util.ISeq
Return a shallow copy of this sequence.
Copyable<T> - Interface in org.jenetics.util
This interface indicates, that a class can create a copy of type T.
Crossover<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
Performs a Crossover of two Chromosome.
Crossover(double) - Constructor for class org.jenetics.Crossover
Constructs an alterer with a given recombination probability.
crossover(MSeq<G>, MSeq<G>) - Method in class org.jenetics.Crossover
Template method which performs the crossover.
crossover(MSeq<G>, MSeq<G>) - Method in class org.jenetics.IntermediateCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class org.jenetics.LineCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class org.jenetics.MultiPointCrossover
 
crossover(MSeq<EnumGene<T>>, MSeq<EnumGene<T>>) - Method in class org.jenetics.PartiallyMatchedCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class org.jenetics.SinglePointCrossover
 
crossover(MSeq<G>, MSeq<G>) - Method in class org.jenetics.UniformCrossover
 

D

decode(Genotype<G>) - Method in interface org.jenetics.engine.Codec
Converts the given Genotype to the target type T.
decoder() - Method in interface org.jenetics.engine.Codec
Return the decoder function which transforms the genotype back to the original problem domain representation.
DEFAULT - Static variable in class org.jenetics.util.LCG64ShiftRandom.Param
The default PRNG parameters: a = 0xFBD19FBBC5C07FF5L; b = 1
DEFAULT_ALTER_PROBABILITY - Static variable in interface org.jenetics.Alterer
The default alter probability: 0.2
DEFAULT_CHARACTERS - Static variable in class org.jenetics.CharacterGene
The default character set used by this gene.
deregister(Class<?>...) - Static method in class org.jenetics.util.IO.JAXB
De-registers the given JAXB model classes.
descending() - Method in enum org.jenetics.Optimize
Create an appropriate comparator of the given optimization strategy.
DoubleChromosome - Class in org.jenetics
Numeric chromosome implementation which holds 64 bit floating point numbers.
DoubleChromosome(ISeq<DoubleGene>) - Constructor for class org.jenetics.DoubleChromosome
Create a new chromosome from the given genes array.
DoubleChromosome(Double, Double, int) - Constructor for class org.jenetics.DoubleChromosome
Create a new random DoubleChromosome.
DoubleChromosome(Double, Double) - Constructor for class org.jenetics.DoubleChromosome
Create a new random DoubleChromosome of length one.
DoubleGene - Class in org.jenetics
Implementation of the NumericGene which holds a 64 bit floating point number.
DoubleMoments - Class in org.jenetics.stat
Value objects which contains statistical moments.
DoubleMomentStatistics - Class in org.jenetics.stat
A state object for collecting statistics such as count, min, max, sum, mean, variance, skewness and kurtosis.
DoubleMomentStatistics() - Constructor for class org.jenetics.stat.DoubleMomentStatistics
Create an empty moments object.
DoubleRange - Class in org.jenetics.util
Double range class.
DoubleSummary - Class in org.jenetics.stat
Value objects which contains statistical summary information.
doubleValue() - Method in class org.jenetics.BitChromosome
Return the double value this BitChromosome represents.
doubleValue(int) - Method in interface org.jenetics.NumericChromosome
Return the double value of this NumericChromosome at the given index.
doubleValue() - Method in interface org.jenetics.NumericChromosome
Return the double value of this NumericChromosome at the index 0.
doubleValue() - Method in interface org.jenetics.NumericGene
Returns the value of the specified gene as an double.

E

empty() - Static method in class org.jenetics.Population
Return an empty population.
EMPTY - Static variable in interface org.jenetics.util.ISeq
Single instance of an empty ISeq.
empty() - Static method in interface org.jenetics.util.ISeq
Return an empty ISeq.
EMPTY - Static variable in interface org.jenetics.util.MSeq
Single instance of an empty MSeq.
empty() - Static method in interface org.jenetics.util.MSeq
Return an empty MSeq.
EMPTY - Static variable in interface org.jenetics.util.Seq
Single instance of an empty Seq.
empty() - Static method in interface org.jenetics.util.Seq
Return an empty Seq.
encoding() - Method in interface org.jenetics.engine.Codec
Return the genotype factory for creating genotypes with the right encoding for the given problem.
Engine<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics.engine
Genetic algorithm engine which is the main class.
Engine.Builder<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics.engine
Builder class for building GA Engine instances.
EnumGene<A> - Class in org.jenetics
Gene which holds enumerable (countable) genes.
equals(Object) - Method in class org.jenetics.AbstractAlterer
 
equals(Object) - Method in class org.jenetics.AbstractChromosome
 
equals(Object) - Method in class org.jenetics.AnyGene
 
equals(Object) - Method in class org.jenetics.BitChromosome
 
equals(Object) - Method in class org.jenetics.BoltzmannSelector
 
equals(Object) - Method in class org.jenetics.CharacterChromosome
 
equals(Object) - Method in class org.jenetics.CharacterGene
 
equals(Object) - Method in class org.jenetics.DoubleChromosome
 
equals(Object) - Method in class org.jenetics.engine.EvolutionDurations
 
equals(Object) - Method in class org.jenetics.engine.EvolutionResult
 
equals(Object) - Method in class org.jenetics.engine.EvolutionStart
 
equals(Object) - Method in class org.jenetics.EnumGene
 
equals(Object) - Method in class org.jenetics.ExponentialRankSelector
 
equals(Object) - Method in class org.jenetics.ExponentialScaler
 
equals(Object) - Method in class org.jenetics.GaussianMutator
 
equals(Object) - Method in class org.jenetics.Genotype
 
equals(Object) - Method in class org.jenetics.IntegerChromosome
 
equals(Object) - Method in class org.jenetics.IntermediateCrossover
 
equals(Object) - Method in class org.jenetics.LinearRankSelector
 
equals(Object) - Method in class org.jenetics.LineCrossover
 
equals(Object) - Method in class org.jenetics.LongChromosome
 
equals(Object) - Method in class org.jenetics.MeanAlterer
 
equals(Object) - Method in class org.jenetics.MonteCarloSelector
 
equals(Object) - Method in class org.jenetics.MultiPointCrossover
 
equals(Object) - Method in class org.jenetics.Mutator
 
equals(Object) - Method in class org.jenetics.PartiallyMatchedCrossover
 
equals(Object) - Method in class org.jenetics.PermutationChromosome
 
equals(Object) - Method in class org.jenetics.Phenotype
 
equals(Object) - Method in class org.jenetics.Population
 
equals(Object) - Method in class org.jenetics.RouletteWheelSelector
 
equals(Object) - Method in class org.jenetics.SinglePointCrossover
 
equals(Object) - Method in class org.jenetics.stat.DoubleMoments
 
equals(Object) - Method in class org.jenetics.stat.DoubleSummary
 
equals(Object) - Method in class org.jenetics.stat.IntMoments
 
equals(Object) - Method in class org.jenetics.stat.IntSummary
 
equals(Object) - Method in class org.jenetics.stat.LongMoments
 
equals(Object) - Method in class org.jenetics.stat.LongSummary
 
equals(Object) - Method in class org.jenetics.StochasticUniversalSelector
 
equals(Object) - Method in class org.jenetics.SwapMutator
 
equals(Object) - Method in class org.jenetics.TournamentSelector
 
equals(Object) - Method in class org.jenetics.TruncationSelector
 
equals(Object) - Method in class org.jenetics.util.CharSeq
 
equals(Object) - Method in class org.jenetics.util.DoubleRange
 
equals(Object) - Method in class org.jenetics.util.IntRange
 
equals(Object) - Method in class org.jenetics.util.LCG64ShiftRandom
 
equals(Object) - Method in class org.jenetics.util.LCG64ShiftRandom.Param
 
equals(Object) - Method in class org.jenetics.util.LongRange
 
equals(Object) - Method in class org.jenetics.util.NanoClock
 
equals(Object) - Method in interface org.jenetics.util.Seq
Compares the specified object with this sequence for equality.
equals(Seq<?>, Object) - Static method in interface org.jenetics.util.Seq
Unified method for compare to sequences for equality.
evaluate() - Method in class org.jenetics.Phenotype
Evaluates the (raw) fitness values and caches it so the fitness calculation is performed only once.
EvolutionDurations - Class in org.jenetics.engine
This class contains timing information about one evolution step.
EvolutionResult<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics.engine
Represents a state of the GA after an evolution step.
EvolutionStart<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics.engine
Represents a state of the GA at the start of an evolution step.
EvolutionStatistics<C extends Comparable<? super C>,FitnessStatistics> - Class in org.jenetics.engine
This class can be used to gather additional statistic information of an evolution process.
EvolutionStream<G extends Gene<?,G>,C extends Comparable<? super C>> - Interface in org.jenetics.engine
The EvolutionStream class extends the Java Stream and adds a method for limiting the evolution by a given predicate.
evolve(Population<G, C>, long) - Method in class org.jenetics.engine.Engine
Perform one evolution step with the given population and generation.
evolve(EvolutionStart<G, C>) - Method in class org.jenetics.engine.Engine
Perform one evolution step with the given evolution start object New phenotypes are created with the fitness function and fitness scaler defined by this engine
executor(Executor) - Method in class org.jenetics.engine.Engine.Builder
The executor used by the engine.
expand(CharSequence) - Static method in class org.jenetics.util.CharSeq
Expands the character range for the given pattern.
expand(char, char) - Static method in class org.jenetics.util.CharSeq
Expands the characters between a and b.
ExponentialRankSelector<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
An alternative to the "weak" LinearRankSelector is to assign survival probabilities to the sorted individuals using an exponential function.
ExponentialRankSelector(double) - Constructor for class org.jenetics.ExponentialRankSelector
Create a new exponential rank selector.
ExponentialRankSelector() - Constructor for class org.jenetics.ExponentialRankSelector
Create a new selector with default value of 0.975.
ExponentialScaler - Class in org.jenetics
Implements an exponential fitness scaling, whereby all fitness values are modified the following way.
ExponentialScaler(double, double, double) - Constructor for class org.jenetics.ExponentialScaler
Create a new FitnessScaler.
ExponentialScaler(double, double) - Constructor for class org.jenetics.ExponentialScaler
Create a new FitnessScaler.
ExponentialScaler(double) - Constructor for class org.jenetics.ExponentialScaler
Create a new FitnessScaler.

F

Factory<T> - Interface in org.jenetics.util
 
fill(Factory<Phenotype<G, C>>, int) - Method in class org.jenetics.Population
Fills the population with individuals created by the given factory.
fill(Supplier<? extends T>) - Method in interface org.jenetics.util.MSeq
Fill the sequence with values generated by the given factory.
fitness() - Method in interface org.jenetics.engine.Problem
Return the fitness function of the problem in the native problem domain.
fitnessFunction(Function<? super Genotype<G>, ? extends C>) - Method in class org.jenetics.engine.Engine.Builder
Set the fitness function of the evolution Engine.
fitnessScaler(Function<? super C, ? extends C>) - Method in class org.jenetics.engine.Engine.Builder
Set the fitness scaler of the evolution Engine.
floatValue() - Method in class org.jenetics.BitChromosome
Return the float value this BitChromosome represents.
floatValue(int) - Method in interface org.jenetics.NumericChromosome
Return the float value of this NumericChromosome at the given index.
floatValue() - Method in interface org.jenetics.NumericChromosome
Return the float value of this NumericChromosome at the index 0.
floatValue() - Method in interface org.jenetics.NumericGene
Returns the value of the specified gene as an float.
forAll(Predicate<? super T>) - Method in interface org.jenetics.util.Seq
Tests whether a predicate holds for all elements of this sequence.

G

GaussianMutator<G extends NumericGene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
The GaussianMutator class performs the mutation of a NumericGene.
GaussianMutator(double) - Constructor for class org.jenetics.GaussianMutator
 
GaussianMutator() - Constructor for class org.jenetics.GaussianMutator
 
Gene<A,G extends Gene<A,G>> - Interface in org.jenetics
Genes are the atoms of the Jenetics library.
Genotype<G extends Gene<?,G>> - Class in org.jenetics
The central class the GA is working with, is the Genotype.
genotypeFactory(Factory<Genotype<G>>) - Method in class org.jenetics.engine.Engine.Builder
The genotype factory used for creating new individuals.
genotypeValidator(Predicate<? super Genotype<G>>) - Method in class org.jenetics.engine.Engine.Builder
The genotype validator used for detecting invalid individuals.
get() - Method in class org.jenetics.BitChromosome
Return the value of the first gene of this chromosome.
get(int) - Method in class org.jenetics.BitChromosome
Return the value on the specified index.
get(int, int) - Method in class org.jenetics.Genotype
Return the gene from the given chromosome- and gene index.
get(int) - Method in class org.jenetics.Population
 
get(int) - Method in interface org.jenetics.util.Seq
Return the value at the given index.
getAge(long) - Method in class org.jenetics.Phenotype
Return the age of this phenotype depending on the given current generation.
getAllele() - Method in class org.jenetics.AnyGene
 
getAllele() - Method in enum org.jenetics.BitGene
 
getAllele() - Method in class org.jenetics.CharacterGene
 
getAllele() - Method in class org.jenetics.EnumGene
 
getAllele() - Method in interface org.jenetics.Gene
Return the allele of this gene.
getAlleleIndex() - Method in class org.jenetics.EnumGene
Return the index of the allele this gene is representing.
getAlterCount() - Method in class org.jenetics.engine.EvolutionResult
The number of altered individuals.
getAlterDuration() - Method in class org.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for altering the population, in seconds.
getAltered() - Method in class org.jenetics.engine.EvolutionStatistics
Return the statistics about the altered individuals during the evolution process.
getAlterer() - Method in class org.jenetics.engine.Engine
Return the used Alterer of the GA.
getAlterers() - Method in class org.jenetics.engine.Engine.Builder
Return the used Alterer of the GA.
getBestFitness() - Method in class org.jenetics.engine.EvolutionResult
Return the best population fitness.
getBestPhenotype() - Method in class org.jenetics.engine.EvolutionResult
Return the best Phenotype of the result population.
getBit() - Method in enum org.jenetics.BitGene
Return the value of the BitGene.
getChromosome(int) - Method in class org.jenetics.Genotype
Return the chromosome at the given index.
getChromosome() - Method in class org.jenetics.Genotype
Return the first chromosome.
getClock() - Method in class org.jenetics.engine.Engine.Builder
Return the Clock the engine is using for measuring the execution time.
getClock() - Method in class org.jenetics.engine.Engine
Return the Clock the engine is using for measuring the execution time.
getCount() - Method in class org.jenetics.stat.DoubleMoments
Returns the count of values recorded.
getCount() - Method in class org.jenetics.stat.DoubleSummary
Returns the count of values recorded.
getCount() - Method in class org.jenetics.stat.IntMoments
Returns the count of values recorded.
getCount() - Method in class org.jenetics.stat.IntSummary
Returns the count of values recorded.
getCount() - Method in class org.jenetics.stat.LongMoments
Returns the count of values recorded.
getCount() - Method in class org.jenetics.stat.LongSummary
Returns the count of values recorded.
getCount() - Method in class org.jenetics.stat.MinMax
Returns the count of values recorded.
getDurations() - Method in class org.jenetics.engine.EvolutionResult
Return the timing (meta) information of the evolution step.
getEvaluationDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for evaluating the fitness function of the new individuals.
getEvaluationDuration() - Method in class org.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for evaluating the fitness function of the new individuals, in seconds.
getEvolveDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for the whole evolve step.
getEvolveDuration() - Method in class org.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for the whole evolve step, in seconds.
getExecutor() - Method in class org.jenetics.engine.Engine.Builder
Return the Executor the engine is using for executing the evolution steps.
getExecutor() - Method in class org.jenetics.engine.Engine
Return the Executor the engine is using for executing the evolution steps.
getFitness() - Method in class org.jenetics.engine.EvolutionStatistics
Return the minimal and maximal fitness.
getFitness() - Method in class org.jenetics.Phenotype
Return the fitness value of this Phenotype.
getFitnessFunction() - Method in class org.jenetics.engine.Engine.Builder
Return the fitness function of the GA engine.
getFitnessFunction() - Method in class org.jenetics.engine.Engine
Return the fitness function of the GA engine.
getFitnessFunction() - Method in class org.jenetics.Phenotype
Return the fitness function used by this phenotype to calculate the (raw) fitness value.
getFitnessScaler() - Method in class org.jenetics.engine.Engine.Builder
Return the fitness scaler of the GA engine.
getFitnessScaler() - Method in class org.jenetics.engine.Engine
Return the fitness scaler of the GA engine.
getFitnessScaler() - Method in class org.jenetics.Phenotype
Return the fitness scaler used by this phenotype to scale the raw fitness.
getGene(int) - Method in class org.jenetics.AbstractChromosome
 
getGene() - Method in class org.jenetics.BitChromosome
 
getGene(int) - Method in class org.jenetics.BitChromosome
 
getGene() - Method in interface org.jenetics.Chromosome
Return the first gene of this chromosome.
getGene(int) - Method in interface org.jenetics.Chromosome
Return the gene on the specified index.
getGene() - Method in class org.jenetics.Genotype
Return the first Gene of the first Chromosome of this Genotype.
getGeneration() - Method in class org.jenetics.engine.EvolutionResult
The current generation.
getGeneration() - Method in class org.jenetics.engine.EvolutionStart
Return the generation of the start population.
getGeneration() - Method in class org.jenetics.Phenotype
Return the generation this Phenotype was created.
getGenotype() - Method in class org.jenetics.Phenotype
This method returns a copy of the Genotype, to guarantee a immutable class.
getGenotypeFactory() - Method in class org.jenetics.engine.Engine.Builder
Return the used genotype Factory of the GA.
getGenotypeFactory() - Method in class org.jenetics.engine.Engine
Return the used genotype Factory of the GA.
getIndividualCreationRetries() - Method in class org.jenetics.engine.Engine.Builder
Return the maximal number of attempt before the Engine gives up creating a valid individual (Phenotype).
getInvalidCount() - Method in class org.jenetics.engine.EvolutionResult
Return the number of invalid individuals.
getInvalids() - Method in class org.jenetics.engine.EvolutionStatistics
Return the statistics about the invalid individuals during the evolution process.
getKillCount() - Method in class org.jenetics.engine.EvolutionResult
Return the number of killed individuals.
getKilled() - Method in class org.jenetics.engine.EvolutionStatistics
Return the statistics about the killed individuals during the evolution process.
getKurtosis() - Method in class org.jenetics.stat.DoubleMoments
Return the kurtosis of values recorded, or Double.NaN if less than four values have been recorded.
getKurtosis() - Method in class org.jenetics.stat.IntMoments
Return the kurtosis of values recorded, or Double.NaN if less than four values have been recorded.
getKurtosis() - Method in class org.jenetics.stat.LongMoments
Return the kurtosis of values recorded, or Double.NaN if less than four values have been recorded.
getMax() - Method in interface org.jenetics.BoundedChromosome
Return the maximum value of this BoundedChromosome.
getMax() - Method in interface org.jenetics.BoundedGene
Return the allowed max value.
getMax() - Method in class org.jenetics.stat.DoubleMoments
Return the maximum value recorded, or Double.NEGATIVE_INFINITY if no values have been recorded.
getMax() - Method in class org.jenetics.stat.DoubleMomentStatistics
Return the maximum value recorded, or Double.NEGATIVE_INFINITY if no values have been recorded.
getMax() - Method in class org.jenetics.stat.DoubleSummary
Return the maximum value recorded, or Double.NEGATIVE_INFINITY if no values have been recorded.
getMax() - Method in class org.jenetics.stat.IntMoments
Return the maximum value recorded, or Integer.MIN_VALUE if no values have been recorded.
getMax() - Method in class org.jenetics.stat.IntMomentStatistics
Return the maximum value recorded, or Integer.MIN_VALUE if no values have been recorded.
getMax() - Method in class org.jenetics.stat.IntSummary
Return the maximum value recorded, or Integer.MIN_VALUE if no values have been recorded.
getMax() - Method in class org.jenetics.stat.LongMoments
Return the maximum value recorded, or Long.MIN_VALUE if no values have been recorded.
getMax() - Method in class org.jenetics.stat.LongMomentStatistics
Return the maximum value recorded, or Long.MIN_VALUE if no values have been recorded.
getMax() - Method in class org.jenetics.stat.LongSummary
Return the maximum value recorded, or Long.MIN_VALUE if no values have been recorded.
getMax() - Method in class org.jenetics.stat.MinMax
Return the current maximal object or null if no element has been accepted yet.
getMax() - Method in class org.jenetics.util.DoubleRange
Return the maximum value of the double range.
getMax() - Method in class org.jenetics.util.IntRange
Return the maximum value of the integer range.
getMax() - Method in class org.jenetics.util.LongRange
Return the maximum value of the long range.
getMaximalPhenotypeAge() - Method in class org.jenetics.engine.Engine.Builder
Return the maximal allowed phenotype age.
getMaximalPhenotypeAge() - Method in class org.jenetics.engine.Engine
Return the maximal allowed phenotype age.
getMean() - Method in class org.jenetics.stat.DoubleMoments
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
getMean() - Method in class org.jenetics.stat.DoubleSummary
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
getMean() - Method in class org.jenetics.stat.IntMoments
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
getMean() - Method in class org.jenetics.stat.IntSummary
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
getMean() - Method in class org.jenetics.stat.LongMoments
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
getMean() - Method in class org.jenetics.stat.LongSummary
Return the arithmetic mean of values recorded, or zero if no values have been recorded.
getMin() - Method in interface org.jenetics.BoundedChromosome
Return the minimum value of this BoundedChromosome.
getMin() - Method in interface org.jenetics.BoundedGene
Return the allowed min value.
getMin() - Method in class org.jenetics.stat.DoubleMoments
Return the minimum value recorded, or Double.POSITIVE_INFINITY if no values have been recorded.
getMin() - Method in class org.jenetics.stat.DoubleMomentStatistics
Return the minimum value recorded, or Double.POSITIVE_INFINITY if no values have been recorded.
getMin() - Method in class org.jenetics.stat.DoubleSummary
Return the minimum value recorded, or Double.POSITIVE_INFINITY if no values have been recorded.
getMin() - Method in class org.jenetics.stat.IntMoments
Return the minimum value recorded, or Integer.MAX_VALUE if no values have been recorded.
getMin() - Method in class org.jenetics.stat.IntMomentStatistics
Return the minimum value recorded, or Integer.MAX_VALUE if no values have been recorded.
getMin() - Method in class org.jenetics.stat.IntSummary
Return the minimum value recorded, or Integer.MAX_VALUE if no values have been recorded.
getMin() - Method in class org.jenetics.stat.LongMoments
Return the minimum value recorded, or Long.MAX_VALUE if no values have been recorded.
getMin() - Method in class org.jenetics.stat.LongMomentStatistics
Return the minimum value recorded, or Long.MAX_VALUE if no values have been recorded.
getMin() - Method in class org.jenetics.stat.LongSummary
Return the minimum value recorded, or Long.MAX_VALUE if no values have been recorded.
getMin() - Method in class org.jenetics.stat.MinMax
Return the current minimal object or null if no element has been accepted yet.
getMin() - Method in class org.jenetics.util.DoubleRange
Return the minimum value of the double range.
getMin() - Method in class org.jenetics.util.IntRange
Return the minimum value of the integer range.
getMin() - Method in class org.jenetics.util.LongRange
Return the minimum value of the long range.
getN() - Method in class org.jenetics.MultiPointCrossover
Return the number of crossover points.
getNumberOfGenes() - Method in class org.jenetics.Genotype
Return the number of genes this genotype consists of.
getOffspringAlterDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for altering the offspring population.
getOffspringCount() - Method in class org.jenetics.engine.Engine
Return the number of selected offsprings.
getOffspringFilterDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for removing and replacing invalid offspring individuals.
getOffspringFraction() - Method in class org.jenetics.engine.Engine.Builder
Return the offspring fraction.
getOffspringSelectionDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for selecting the offspring population.
getOffspringSelector() - Method in class org.jenetics.engine.Engine.Builder
Return the used offspring Selector of the GA.
getOffspringSelector() - Method in class org.jenetics.engine.Engine
Return the used offspring Selector of the GA.
getOptimize() - Method in class org.jenetics.engine.Engine.Builder
Return the optimization strategy.
getOptimize() - Method in class org.jenetics.engine.Engine
Return the optimization strategy.
getOptimize() - Method in class org.jenetics.engine.EvolutionResult
Return the optimization strategy used.
getOrder() - Method in class org.jenetics.Recombinator
Return the number of individuals involved in the Recombinator.recombine(Population, int[], long) step.
getParam() - Method in class org.jenetics.util.LCG64ShiftRandom
 
getPhenotypeAge() - Method in class org.jenetics.engine.EvolutionStatistics
Return the statistics about the individuals age.
getPopulation() - Method in class org.jenetics.engine.EvolutionResult
Return the population after the evolution step.
getPopulation() - Method in class org.jenetics.engine.EvolutionStart
Return the population before the evolution step.
getPopulationSize() - Method in class org.jenetics.engine.Engine.Builder
Return the number of individuals of a population.
getPopulationSize() - Method in class org.jenetics.engine.Engine
Return the number of individuals of a population.
getProbability() - Method in class org.jenetics.AbstractAlterer
Return the recombination/alter probability for this alterer.
getQuantile() - Method in class org.jenetics.stat.Quantile
Return the quantile this object has been parametrized with.
getRandom() - Static method in class org.jenetics.util.RandomRegistry
Return the global Random object.
getRawFitness() - Method in class org.jenetics.Phenotype
Return the raw fitness (before scaling) of the phenotype.
getSamples() - Method in class org.jenetics.stat.Quantile
Return the number of samples the quantile value was calculated of.
getSelectionDuration() - Method in class org.jenetics.engine.EvolutionStatistics
Return the duration statistics needed for selecting the population, in seconds.
getSkewness() - Method in class org.jenetics.stat.DoubleMoments
Return the skewness of values recorded, or Double.NaN if less than two values have been recorded.
getSkewness() - Method in class org.jenetics.stat.IntMoments
Return the skewness of values recorded, or Double.NaN if less than two values have been recorded.
getSkewness() - Method in class org.jenetics.stat.LongMoments
Return the skewness of values recorded, or Double.NaN if less than two values have been recorded.
getSum() - Method in class org.jenetics.stat.DoubleMoments
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.DoubleMomentStatistics
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.DoubleSummary
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.IntMoments
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.IntMomentStatistics
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.IntSummary
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.LongMoments
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.LongMomentStatistics
Return the sum of values recorded, or zero if no values have been recorded.
getSum() - Method in class org.jenetics.stat.LongSummary
Return the sum of values recorded, or zero if no values have been recorded.
getSurvivorFilterDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for removing and replacing old and invalid survivor individuals.
getSurvivorsCount() - Method in class org.jenetics.engine.Engine
The number of selected survivors.
getSurvivorsSelectionDuration() - Method in class org.jenetics.engine.EvolutionDurations
Return the duration needed for selecting the survivors population.
getSurvivorsSelector() - Method in class org.jenetics.engine.Engine.Builder
Return the used survivor Selector of the GA.
getSurvivorsSelector() - Method in class org.jenetics.engine.Engine
Return the used survivor Selector of the GA.
getSwapProbability() - Method in class org.jenetics.UniformCrossover
Return the probability for swapping genes of a chromosome.
getTotalGenerations() - Method in class org.jenetics.engine.EvolutionResult
Return the generation count evaluated so far.
getValidAlleles() - Method in class org.jenetics.EnumGene
Return sequence of the valid alleles where this gene is a part of.
getValidAlleles() - Method in class org.jenetics.PermutationChromosome
Return the sequence of valid alleles of this chromosome.
getValidCharacters() - Method in class org.jenetics.CharacterGene
Return a (unmodifiable) set of valid characters.
getValue() - Method in class org.jenetics.stat.Quantile
Return the computed quantile value.
getVariance() - Method in class org.jenetics.stat.DoubleMoments
Return the variance of values recorded, or Double.NaN if no values have been recorded.
getVariance() - Method in class org.jenetics.stat.IntMoments
Return the variance of values recorded, or Double.NaN if no values have been recorded.
getVariance() - Method in class org.jenetics.stat.LongMoments
Return the variance of values recorded, or Double.NaN if no values have been recorded.
getWorstFitness() - Method in class org.jenetics.engine.EvolutionResult
Return the worst population fitness.
getWorstPhenotype() - Method in class org.jenetics.engine.EvolutionResult
Return the worst Phenotype of the result population.
getZone() - Method in class org.jenetics.util.NanoClock
 

H

hashCode() - Method in class org.jenetics.AbstractAlterer
 
hashCode() - Method in class org.jenetics.AbstractChromosome
 
hashCode() - Method in class org.jenetics.AnyGene
 
hashCode() - Method in class org.jenetics.BitChromosome
 
hashCode() - Method in class org.jenetics.BoltzmannSelector
 
hashCode() - Method in class org.jenetics.CharacterChromosome
 
hashCode() - Method in class org.jenetics.CharacterGene
 
hashCode() - Method in class org.jenetics.DoubleChromosome
 
hashCode() - Method in class org.jenetics.engine.EvolutionDurations
 
hashCode() - Method in class org.jenetics.engine.EvolutionResult
 
hashCode() - Method in class org.jenetics.engine.EvolutionStart
 
hashCode() - Method in class org.jenetics.EnumGene
 
hashCode() - Method in class org.jenetics.ExponentialRankSelector
 
hashCode() - Method in class org.jenetics.ExponentialScaler
 
hashCode() - Method in class org.jenetics.GaussianMutator
 
hashCode() - Method in class org.jenetics.Genotype
 
hashCode() - Method in class org.jenetics.IntegerChromosome
 
hashCode() - Method in class org.jenetics.IntermediateCrossover
 
hashCode() - Method in class org.jenetics.LinearRankSelector
 
hashCode() - Method in class org.jenetics.LineCrossover
 
hashCode() - Method in class org.jenetics.LongChromosome
 
hashCode() - Method in class org.jenetics.MeanAlterer
 
hashCode() - Method in class org.jenetics.MonteCarloSelector
 
hashCode() - Method in class org.jenetics.MultiPointCrossover
 
hashCode() - Method in class org.jenetics.Mutator
 
hashCode() - Method in class org.jenetics.PartiallyMatchedCrossover
 
hashCode() - Method in class org.jenetics.PermutationChromosome
 
hashCode() - Method in class org.jenetics.Phenotype
 
hashCode() - Method in class org.jenetics.Population
 
hashCode() - Method in class org.jenetics.RouletteWheelSelector
 
hashCode() - Method in class org.jenetics.SinglePointCrossover
 
hashCode() - Method in class org.jenetics.stat.DoubleMoments
 
hashCode() - Method in class org.jenetics.stat.DoubleSummary
 
hashCode() - Method in class org.jenetics.stat.IntMoments
 
hashCode() - Method in class org.jenetics.stat.IntSummary
 
hashCode() - Method in class org.jenetics.stat.LongMoments
 
hashCode() - Method in class org.jenetics.stat.LongSummary
 
hashCode() - Method in class org.jenetics.StochasticUniversalSelector
 
hashCode() - Method in class org.jenetics.SwapMutator
 
hashCode() - Method in class org.jenetics.TournamentSelector
 
hashCode() - Method in class org.jenetics.TruncationSelector
 
hashCode() - Method in class org.jenetics.util.CharSeq
 
hashCode() - Method in class org.jenetics.util.DoubleRange
 
hashCode() - Method in class org.jenetics.util.IntRange
 
hashCode() - Method in class org.jenetics.util.LCG64ShiftRandom
 
hashCode() - Method in class org.jenetics.util.LCG64ShiftRandom.Param
 
hashCode() - Method in class org.jenetics.util.LongRange
 
hashCode() - Method in class org.jenetics.util.NanoClock
 
hashCode() - Method in interface org.jenetics.util.Seq
Returns the hash code value for this sequence.
hashCode(Seq<?>) - Static method in interface org.jenetics.util.Seq
Unified method for calculating the hash code of every Seq implementation.

I

indexOf(Object) - Method in class org.jenetics.Population
 
indexOf(Object) - Method in interface org.jenetics.util.Seq
Returns the index of the first occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
indexOf(Object, int) - Method in interface org.jenetics.util.Seq
Returns the index of the first occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
indexOf(Object, int, int) - Method in interface org.jenetics.util.Seq
Returns the index of the first occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
indexWhere(Predicate<? super T>) - Method in interface org.jenetics.util.Seq
Returns the index of the first element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
indexWhere(Predicate<? super T>, int) - Method in interface org.jenetics.util.Seq
Returns the index of the first element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
indexWhere(Predicate<? super T>, int, int) - Method in interface org.jenetics.util.Seq
Returns the index of the first element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
individualCreationRetries(int) - Method in class org.jenetics.engine.Engine.Builder
The maximal number of attempt before the Engine gives up creating a valid individual (Phenotype).
initialValue() - Method in class org.jenetics.util.LCG64ShiftRandom.ThreadLocal
Create a new PRNG using block splitting for guaranteeing well distributed PRN for every thread.
instances() - Method in interface org.jenetics.util.Factory
Return a new stream of object instances, created by this factory.
instant() - Method in class org.jenetics.util.NanoClock
 
IntegerChromosome - Class in org.jenetics
Numeric chromosome implementation which holds 32 bit integer numbers.
IntegerChromosome(ISeq<IntegerGene>) - Constructor for class org.jenetics.IntegerChromosome
Create a new chromosome from the given genes array.
IntegerChromosome(Integer, Integer, int) - Constructor for class org.jenetics.IntegerChromosome
Create a new random IntegerChromosome.
IntegerChromosome(Integer, Integer) - Constructor for class org.jenetics.IntegerChromosome
Create a new random IntegerChromosome of length one.
IntegerGene - Class in org.jenetics
NumericGene implementation which holds a 32 bit integer number.
IntermediateCrossover<G extends NumericGene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
This alterer takes two chromosome (treating it as vectors) and creates a linear combination of this vectors as result.
IntermediateCrossover(double, double) - Constructor for class org.jenetics.IntermediateCrossover
Creates a new intermediate-crossover with the given recombination probability and the line-scaling factor p.
IntermediateCrossover(double) - Constructor for class org.jenetics.IntermediateCrossover
Creates a new intermediate-crossover with the given recombination probability.
IntermediateCrossover() - Constructor for class org.jenetics.IntermediateCrossover
Creates a new intermediate-crossover with default recombination probability (Alterer.DEFAULT_ALTER_PROBABILITY) and a p value of zero, which restricts the recombined chromosomes within the hypercube of the selected chromosomes (vectors).
IntMoments - Class in org.jenetics.stat
Value objects which contains statistical moments.
IntMomentStatistics - Class in org.jenetics.stat
A state object for collecting statistics such as count, min, max, sum, mean, variance, skewness and kurtosis.
IntMomentStatistics() - Constructor for class org.jenetics.stat.IntMomentStatistics
Create an empty moments object.
IntRange - Class in org.jenetics.util
Integer range class.
IntSummary - Class in org.jenetics.stat
Value objects which contains statistical summary information.
intValue() - Method in class org.jenetics.BitChromosome
Return the long value this BitChromosome represents.
intValue(int) - Method in interface org.jenetics.NumericChromosome
Return the int value of this NumericChromosome at the given index.
intValue() - Method in interface org.jenetics.NumericChromosome
Return the int value of this NumericChromosome at the index 0.
intValue() - Method in interface org.jenetics.NumericGene
Returns the value of the specified gene as an int.
invert() - Method in class org.jenetics.BitChromosome
Invert the ones and zeros of this bit chromosome.
IO - Class in org.jenetics.util
Class for object serialization.
IO() - Constructor for class org.jenetics.util.IO
 
IO.JAXB - Class in org.jenetics.util
Helper class for JAXB class registering/de-registering.
isEmpty() - Method in class org.jenetics.Population
 
isEmpty() - Method in class org.jenetics.util.CharSeq
Test whether this character set is empty.
isEmpty() - Method in interface org.jenetics.util.Seq
Returns true if this sequence contains no elements.
ISeq<T> - Interface in org.jenetics.util
Immutable, ordered, fixed sized sequence.
isSorted() - Method in interface org.jenetics.util.Seq
Test whether the given array is sorted in ascending order.
isSorted(Comparator<? super T>) - Method in interface org.jenetics.util.Seq
Test whether the given array is sorted in ascending order.
isValid() - Method in class org.jenetics.AbstractChromosome
 
isValid() - Method in class org.jenetics.AnyChromosome
 
isValid() - Method in class org.jenetics.AnyGene
 
isValid() - Method in class org.jenetics.BitChromosome
 
isValid() - Method in enum org.jenetics.BitGene
Return always true.
isValid() - Method in interface org.jenetics.BoundedGene
 
isValid() - Method in class org.jenetics.CharacterGene
 
isValid() - Method in class org.jenetics.EnumGene
 
isValid() - Method in class org.jenetics.Genotype
Test if this genotype is valid.
isValid() - Method in class org.jenetics.PermutationChromosome
Check if this chromosome represents still a valid permutation (or subset) of the given valid alleles.
isValid() - Method in class org.jenetics.Phenotype
Test whether this phenotype is valid.
isValid() - Method in interface org.jenetics.util.Verifiable
Check if this object is valid.
isValidCharacter(Character) - Method in class org.jenetics.CharacterGene
Test, if the given character is valid.
iterator() - Method in class org.jenetics.AbstractChromosome
 
iterator() - Method in class org.jenetics.BitChromosome
 
iterator() - Method in class org.jenetics.engine.Engine
Create a new infinite evolution iterator with a newly created population.
iterator(Iterable<Genotype<G>>) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution iterator with the given initial individuals.
iterator(Iterable<Genotype<G>>, long) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution iterator with the given initial individuals.
iterator(Population<G, C>) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution iterator with the given initial population.
iterator(Population<G, C>, long) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution iterator with the given initial population.
iterator(EvolutionResult<G, C>) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution iterator starting with a previously evolved EvolutionResult.
iterator() - Method in class org.jenetics.Genotype
 
iterator() - Method in class org.jenetics.Population
 
iterator() - Method in interface org.jenetics.util.Seq
 

J

jaxb - Static variable in class org.jenetics.util.IO
JAXB for XML serialization.
jump(long) - Method in class org.jenetics.util.LCG64ShiftRandom
Changes the internal state of the PRNG in such a way that the engine jumps s steps ahead.
jump(long) - Method in class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
 
jump2(int) - Method in class org.jenetics.util.LCG64ShiftRandom
Changes the internal state of the PRNG in such a way that the engine jumps 2s steps ahead.
jump2(int) - Method in class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
 

L

lastIndexOf(Object) - Method in class org.jenetics.Population
 
lastIndexOf(Object) - Method in interface org.jenetics.util.Seq
Returns the index of the last occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
lastIndexOf(Object, int) - Method in interface org.jenetics.util.Seq
Returns the index of the last occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
lastIndexOf(Object, int, int) - Method in interface org.jenetics.util.Seq
Returns the index of the last occurrence of the specified element in this sequence, or -1 if this sequence does not contain the element.
lastIndexWhere(Predicate<? super T>) - Method in interface org.jenetics.util.Seq
Returns the index of the last element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
lastIndexWhere(Predicate<? super T>, int) - Method in interface org.jenetics.util.Seq
Returns the index of the last element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
lastIndexWhere(Predicate<? super T>, int, int) - Method in interface org.jenetics.util.Seq
Returns the index of the last element on which the given predicate returns true, or -1 if the predicate returns false for every sequence element.
LCG64ShiftRandom - Class in org.jenetics.util
This class implements a linear congruential PRNG with additional bit-shift transition.
LCG64ShiftRandom(LCG64ShiftRandom.Param, long) - Constructor for class org.jenetics.util.LCG64ShiftRandom
Create a new PRNG instance with the given parameter and seed.
LCG64ShiftRandom(LCG64ShiftRandom.Param) - Constructor for class org.jenetics.util.LCG64ShiftRandom
Create a new PRNG instance with the given parameter and a safe seed
LCG64ShiftRandom(long) - Constructor for class org.jenetics.util.LCG64ShiftRandom
Create a new PRNG instance with LCG64ShiftRandom.Param.DEFAULT parameter and the given seed.
LCG64ShiftRandom() - Constructor for class org.jenetics.util.LCG64ShiftRandom
Create a new PRNG instance with LCG64ShiftRandom.Param.DEFAULT parameter and safe seed.
LCG64ShiftRandom.Param - Class in org.jenetics.util
Parameter class for the LCG64ShiftRandom generator, for the parameters a and b of the LC recursion ri+1 = a ยท ri + b mod 264.
LCG64ShiftRandom.ThreadLocal - Class in org.jenetics.util
This class represents a thread local implementation of the LCG64ShiftRandom PRNG.
LCG64ShiftRandom.ThreadSafe - Class in org.jenetics.util
This is a thread safe variation of the this PRNG—by synchronizing the random number generation.
LECUYER1 - Static variable in class org.jenetics.util.LCG64ShiftRandom.Param
LEcuyer 1 parameters: a = 0x27BB2EE687B0B0FDL; b = 1
LECUYER2 - Static variable in class org.jenetics.util.LCG64ShiftRandom.Param
LEcuyer 2 parameters: a = 0x2C6FE96EE78B6955L; b = 1
LECUYER3 - Static variable in class org.jenetics.util.LCG64ShiftRandom.Param
LEcuyer 3 parameters: a = 0x369DEA0F31A53F85L; b = 1
length() - Method in class org.jenetics.AbstractChromosome
 
length() - Method in class org.jenetics.BitChromosome
 
length() - Method in interface org.jenetics.Chromosome
Returns the length of the Chromosome.
length() - Method in class org.jenetics.Genotype
Getting the number of chromosomes of this genotype.
length() - Method in class org.jenetics.util.CharSeq
 
length() - Method in interface org.jenetics.util.Seq
Return the length of this sequence.
limit(Predicate<? super EvolutionResult<G, C>>) - Method in interface org.jenetics.engine.EvolutionStream
Returns a stream consisting of the elements of this stream, truncated when the given proceed predicate returns false.
limit - Class in org.jenetics.engine
This class contains factory methods for creating predicates, which can be used for limiting the evolution stream.
LinearRankSelector<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
In linear-ranking selection the individuals are sorted according to their fitness values.
LinearRankSelector(double) - Constructor for class org.jenetics.LinearRankSelector
Create a new LinearRankSelector with the given values for nminus.
LinearRankSelector() - Constructor for class org.jenetics.LinearRankSelector
Create a new LinearRankSelector with nminus := 0.5.
LineCrossover<G extends NumericGene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
This alterer takes two chromosome (treating it as vectors) and creates a linear combination of this vectors as result.
LineCrossover(double, double) - Constructor for class org.jenetics.LineCrossover
Creates a new linear-crossover with the given recombination probability and the line-scaling factor p.
LineCrossover(double) - Constructor for class org.jenetics.LineCrossover
Creates a new linear-crossover with the given recombination probability.
LineCrossover() - Constructor for class org.jenetics.LineCrossover
Creates a new linear-crossover with default recombination probability (Alterer.DEFAULT_ALTER_PROBABILITY) and a p value of zero, which restricts the recombined chromosomes within the hypercube of the selected chromosomes (vectors).
listIterator() - Method in class org.jenetics.BitChromosome
 
listIterator() - Method in class org.jenetics.Population
 
listIterator(int) - Method in class org.jenetics.Population
 
listIterator() - Method in interface org.jenetics.util.MSeq
Returns a list iterator over the elements in this sequence (in proper sequence).
listIterator() - Method in interface org.jenetics.util.Seq
 
LongChromosome - Class in org.jenetics
Numeric chromosome implementation which holds 64 bit integer numbers.
LongChromosome(ISeq<LongGene>) - Constructor for class org.jenetics.LongChromosome
 
LongChromosome(Long, Long, int) - Constructor for class org.jenetics.LongChromosome
Create a new random LongChromosome.
LongChromosome(Long, Long) - Constructor for class org.jenetics.LongChromosome
Create a new random LongChromosome of length one.
LongGene - Class in org.jenetics
NumericGene implementation which holds a 64 bit integer number.
LongMoments - Class in org.jenetics.stat
Value objects which contains statistical moments.
LongMomentStatistics - Class in org.jenetics.stat
A state object for collecting statistics such as count, min, max, sum, mean, variance, skewness and kurtosis.
LongMomentStatistics() - Constructor for class org.jenetics.stat.LongMomentStatistics
Create an empty moments object.
LongRange - Class in org.jenetics.util
Long range class.
LongSummary - Class in org.jenetics.stat
Value objects which contains statistical summary information.
longValue() - Method in class org.jenetics.BitChromosome
Return the long value this BitChromosome represents.
longValue(int) - Method in interface org.jenetics.NumericChromosome
Return the long value of this NumericChromosome at the given index.
longValue() - Method in interface org.jenetics.NumericChromosome
Return the long value of this NumericChromosome at the index 0.
longValue() - Method in interface org.jenetics.NumericGene
Returns the value of the specified gene as an long.

M

map(Function<? super T, ? extends B>) - Method in interface org.jenetics.util.ISeq
 
map(Function<? super T, ? extends B>) - Method in interface org.jenetics.util.MSeq
 
map(Function<? super T, ? extends B>) - Method in interface org.jenetics.util.Seq
Builds a new sequence by applying a function to all elements of this sequence.
max(Comparator<? super T>, T, T) - Static method in class org.jenetics.stat.MinMax
Return the maximum of two values, according the given comparator.
maximalPhenotypeAge(long) - Method in class org.jenetics.engine.Engine.Builder
The maximal allowed age of a phenotype.
maximizing() - Method in class org.jenetics.engine.Engine.Builder
Set to a fitness maximizing strategy.
mean(DoubleGene) - Method in class org.jenetics.DoubleGene
 
mean(IntegerGene) - Method in class org.jenetics.IntegerGene
 
mean(LongGene) - Method in class org.jenetics.LongGene
 
Mean<T> - Interface in org.jenetics.util
A mixin interface for genes which can have a mean value.
mean(T) - Method in interface org.jenetics.util.Mean
Return the (usually arithmetic) mean value of this and that.
MeanAlterer<G extends Gene<?,G> & Mean<G>,C extends Comparable<? super C>> - Class in org.jenetics
The order (Recombinator.getOrder()) of this Recombination implementation is two.
MeanAlterer(double) - Constructor for class org.jenetics.MeanAlterer
Constructs an alterer with a given recombination probability.
MeanAlterer() - Constructor for class org.jenetics.MeanAlterer
Create a new alterer with alter probability of 0.05.
millis() - Method in class org.jenetics.util.NanoClock
 
min(Comparator<? super T>, T, T) - Static method in class org.jenetics.stat.MinMax
Return the minimum of two values, according the given comparator.
minimizing() - Method in class org.jenetics.engine.Engine.Builder
Set to a fitness minimizing strategy.
MinMax<C> - Class in org.jenetics.stat
This consumer class is used for calculating the min and max value according to the given Comparator.
MonteCarloSelector<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
The Monte Carlo selector selects the individuals from a given population randomly.
MonteCarloSelector() - Constructor for class org.jenetics.MonteCarloSelector
 
MSeq<T> - Interface in org.jenetics.util
Mutable, ordered, fixed sized sequence.
MultiPointCrossover<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
Multiple point crossover
MultiPointCrossover(double, int) - Constructor for class org.jenetics.MultiPointCrossover
Create a new crossover instance.
MultiPointCrossover(double) - Constructor for class org.jenetics.MultiPointCrossover
Create a new crossover instance with two crossover points.
MultiPointCrossover(int) - Constructor for class org.jenetics.MultiPointCrossover
Create a new crossover instance with default crossover probability of 0.05.
MultiPointCrossover() - Constructor for class org.jenetics.MultiPointCrossover
Create a new crossover instance with two crossover points and crossover probability 0.05.
mutate(MSeq<G>, double) - Method in class org.jenetics.GaussianMutator
 
mutate(MSeq<G>, double) - Method in class org.jenetics.Mutator
Template method which gives an (re)implementation of the mutation class the possibility to perform its own mutation operation, based on a writable gene array and the gene mutation probability p.
mutate(MSeq<G>, double) - Method in class org.jenetics.SwapMutator
Swaps the genes in the given array, with the mutation probability of this mutation.
Mutator<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
This class is for mutating a chromosomes of an given population.
Mutator(double) - Constructor for class org.jenetics.Mutator
Construct a Mutation object which a given mutation probability.
Mutator() - Constructor for class org.jenetics.Mutator
Default constructor, with probability = 0.01.

N

NanoClock - Class in org.jenetics.util
Clock implementation with nano second precision.
nanos() - Method in class org.jenetics.util.NanoClock
This returns the nanosecond-based instant, measured from 1970-01-01T00:00Z (UTC).
NANOS_PER_SECOND - Static variable in class org.jenetics.util.NanoClock
This constants holds the number of nano seconds of one second.
newInstance(ISeq<AnyGene<A>>) - Method in class org.jenetics.AnyChromosome
 
newInstance() - Method in class org.jenetics.AnyChromosome
 
newInstance() - Method in class org.jenetics.AnyGene
 
newInstance(A) - Method in class org.jenetics.AnyGene
 
newInstance(ISeq<BitGene>) - Method in class org.jenetics.BitChromosome
 
newInstance() - Method in class org.jenetics.BitChromosome
 
newInstance() - Method in enum org.jenetics.BitGene
Create a new, random gene.
newInstance(Boolean) - Method in enum org.jenetics.BitGene
Create a new gene from the given value..
newInstance(A) - Method in interface org.jenetics.BoundedGene
Create a new gene from the given value and the current bounds.
newInstance(ISeq<CharacterGene>) - Method in class org.jenetics.CharacterChromosome
 
newInstance() - Method in class org.jenetics.CharacterChromosome
Create a new, random chromosome.
newInstance() - Method in class org.jenetics.CharacterGene
 
newInstance(Character) - Method in class org.jenetics.CharacterGene
Create a new character gene from the given character.
newInstance(ISeq<G>) - Method in interface org.jenetics.Chromosome
A factory method which creates a new Chromosome of specific type and the given genes.
newInstance(ISeq<DoubleGene>) - Method in class org.jenetics.DoubleChromosome
 
newInstance() - Method in class org.jenetics.DoubleChromosome
 
newInstance(Number) - Method in class org.jenetics.DoubleGene
 
newInstance() - Method in class org.jenetics.DoubleGene
 
newInstance() - Method in class org.jenetics.EnumGene
 
newInstance(A) - Method in class org.jenetics.EnumGene
Create a new gene from the given value and the gene context.
newInstance() - Method in interface org.jenetics.Gene
Return a new, random gene with the same type and with the same constraints than this gene.
newInstance(A) - Method in interface org.jenetics.Gene
Create a new gene from the given value and the gene context.
newInstance() - Method in class org.jenetics.Genotype
Return a new, random genotype by creating new, random chromosomes (calling the Factory.newInstance() method) from the chromosomes of this genotype.
newInstance(ISeq<IntegerGene>) - Method in class org.jenetics.IntegerChromosome
 
newInstance() - Method in class org.jenetics.IntegerChromosome
 
newInstance(Number) - Method in class org.jenetics.IntegerGene
 
newInstance() - Method in class org.jenetics.IntegerGene
 
newInstance(ISeq<LongGene>) - Method in class org.jenetics.LongChromosome
 
newInstance() - Method in class org.jenetics.LongChromosome
 
newInstance(Number) - Method in class org.jenetics.LongGene
 
newInstance() - Method in class org.jenetics.LongGene
 
newInstance(Number) - Method in interface org.jenetics.NumericGene
 
newInstance() - Method in class org.jenetics.PermutationChromosome
Create a new, random chromosome.
newInstance(ISeq<EnumGene<T>>) - Method in class org.jenetics.PermutationChromosome
 
newInstance(Genotype<G>) - Method in class org.jenetics.Phenotype
Create a new Phenotype with a different Genotype but the same generation, fitness function and fitness scaler.
newInstance(Genotype<G>, long) - Method in class org.jenetics.Phenotype
Factory method for creating a new Phenotype with the same Function and age as this Phenotype.
newInstance(long, Function<? super Genotype<G>, ? extends C>, Function<? super C, ? extends C>) - Method in class org.jenetics.Phenotype
Return a new phenotype with the the genotype of this and with new fitness function, fitness scaler and generation.
newInstance(long, Function<? super Genotype<G>, ? extends C>) - Method in class org.jenetics.Phenotype
Return a new phenotype with the the genotype of this and with new fitness function and generation.
newInstance() - Method in interface org.jenetics.util.Factory
Create a new instance of type T.
next(int) - Method in class org.jenetics.util.Random64
 
nextBoolean() - Method in class org.jenetics.util.Random64
 
nextBytes(byte[]) - Method in class org.jenetics.util.Random64
Optimized version of the Random.nextBytes(byte[]) method for 64-bit random engines.
nextDouble() - Method in class org.jenetics.util.Random64
Optimized version of the Random.nextDouble() method for 64-bit random engines.
nextFloat() - Method in class org.jenetics.util.Random64
 
nextInt() - Method in class org.jenetics.util.Random64
 
nextLong() - Method in class org.jenetics.util.LCG64ShiftRandom
 
nextLong() - Method in class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
 
nextLong() - Method in class org.jenetics.util.Random64
Force to explicitly override the Random.nextLong() method.
NumericChromosome<N extends Number & Comparable<? super N>,G extends NumericGene<N,G>> - Interface in org.jenetics
Numeric chromosome interface.
NumericGene<N extends Number & Comparable<? super N>,G extends NumericGene<N,G>> - Interface in org.jenetics
Base interface for numeric genes.

O

object - Static variable in class org.jenetics.util.IO
IO implementation for "native" Java serialization.
of(Alterer<G, C>...) - Static method in interface org.jenetics.Alterer
Combine the given alterers.
of(Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<? super A>>, int) - Static method in class org.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>, int) - Static method in class org.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>, Predicate<? super A>) - Static method in class org.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters and length one.
of(Supplier<? extends A>, int) - Static method in class org.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters.
of(Supplier<? extends A>) - Static method in class org.jenetics.AnyChromosome
Create a new chromosome of type A with the given parameters and length one.
of(A, Supplier<? extends A>, Predicate<? super A>) - Static method in class org.jenetics.AnyGene
Create a new AnyGene instance with the given parameters.
of(A, Supplier<? extends A>) - Static method in class org.jenetics.AnyGene
Create a new AnyGene instance with the given parameters.
of(Supplier<? extends A>) - Static method in class org.jenetics.AnyGene
Create a new AnyGene instance with the given allele supplier.
of(Supplier<? extends A>, Predicate<? super A>) - Static method in class org.jenetics.AnyGene
Create a new AnyGene instance with the given parameters.
of(int, double) - Static method in class org.jenetics.BitChromosome
Construct a new BitChromosome with the given _length.
of(int) - Static method in class org.jenetics.BitChromosome
Constructing a new BitChromosome with the given _length.
of(BitSet, int) - Static method in class org.jenetics.BitChromosome
 
of(BitSet) - Static method in class org.jenetics.BitChromosome
Constructing a new BitChromosome from a given BitSet.
of(BigInteger) - Static method in class org.jenetics.BitChromosome
Create a new BitChromosome from the given big integer value.
of(CharSequence) - Static method in class org.jenetics.BitChromosome
Create a new BitChromosome from the given character sequence containing '0' and '1'; as created with the BitChromosome.toCanonicalString() method.
of(boolean) - Static method in enum org.jenetics.BitGene
Return the corresponding BitGene for the given boolean value.
of(int) - Static method in class org.jenetics.CharacterChromosome
Create a new chromosome with the CharacterGene.DEFAULT_CHARACTERS char set as valid characters.
of(String, CharSeq) - Static method in class org.jenetics.CharacterChromosome
Create a new chromosome from the given genes (given as string).
of(String) - Static method in class org.jenetics.CharacterChromosome
Create a new chromosome from the given genes (given as string).
of(CharSeq) - Static method in class org.jenetics.CharacterGene
Create a new CharacterGene with a randomly chosen character from the set of valid characters.
of(Character) - Static method in class org.jenetics.CharacterGene
Create a new character gene from the given character.
of() - Static method in class org.jenetics.CharacterGene
Create a new random character gene, chosen from the CharacterGene.DEFAULT_CHARACTERS.
of(char, CharSeq) - Static method in class org.jenetics.CharacterGene
Create a new CharacterGene from the give character.
of(DoubleGene...) - Static method in class org.jenetics.DoubleChromosome
Create a new DoubleChromosome with the given genes.
of(double, double, int) - Static method in class org.jenetics.DoubleChromosome
Create a new random DoubleChromosome.
of(DoubleRange, int) - Static method in class org.jenetics.DoubleChromosome
Create a new random DoubleChromosome.
of(double, double) - Static method in class org.jenetics.DoubleChromosome
Create a new random DoubleChromosome of length one.
of(DoubleRange) - Static method in class org.jenetics.DoubleChromosome
Create a new random DoubleChromosome of length one.
of(double, double, double) - Static method in class org.jenetics.DoubleGene
Create a new random DoubleGene with the given value and the given range.
of(double, DoubleRange) - Static method in class org.jenetics.DoubleGene
Create a new random DoubleGene with the given value and the given range.
of(double, double) - Static method in class org.jenetics.DoubleGene
Create a new random DoubleGene.
of(DoubleRange) - Static method in class org.jenetics.DoubleGene
Create a new random DoubleGene.
of(Factory<Genotype<G>>, Function<Genotype<G>, T>) - Static method in interface org.jenetics.engine.Codec
Create a new Codec object with the given encoding and decoder function.
of(Codec<A, G>, Codec<B, G>, BiFunction<A, B, T>) - Static method in interface org.jenetics.engine.Codec
Converts two given Codec instances into one.
of(ISeq<? extends Codec<?, G>>, Function<? super Object[], ? extends T>) - Static method in interface org.jenetics.engine.Codec
Combines the given codecs into one codec.
of(Duration, Duration, Duration, Duration, Duration, Duration, Duration) - Static method in class org.jenetics.engine.EvolutionDurations
Return an new EvolutionDurations object with the given values.
of(Optimize, Population<G, C>, long, long, EvolutionDurations, int, int, int) - Static method in class org.jenetics.engine.EvolutionResult
Return an new EvolutionResult object with the given values.
of(Optimize, Population<G, C>, long, EvolutionDurations, int, int, int) - Static method in class org.jenetics.engine.EvolutionResult
Return an new EvolutionResult object with the given values.
of(Population<G, C>, long) - Static method in class org.jenetics.engine.EvolutionStart
Create a new evolution start object with the given population and for the given generation.
of(Supplier<EvolutionStart<G, C>>, Function<? super EvolutionStart<G, C>, EvolutionResult<G, C>>) - Static method in interface org.jenetics.engine.EvolutionStream
Create a new EvolutionStream from the given start population and evolution function.
of(Function<T, C>, Codec<T, G>) - Static method in interface org.jenetics.engine.Problem
Return a new optimization problem with the given parameters.
of(int, ISeq<? extends A>) - Static method in class org.jenetics.EnumGene
Create a new enum gene from the given valid genes and the chosen allele index.
of(ISeq<? extends A>) - Static method in class org.jenetics.EnumGene
Return a new enum gene with an allele randomly chosen from the given valid alleles.
of(int, A...) - Static method in class org.jenetics.EnumGene
Create a new enum gene from the given valid genes and the chosen allele index.
of(A...) - Static method in class org.jenetics.EnumGene
Return a new enum gene with an allele randomly chosen from the given valid alleles.
of(Chromosome<G>, Chromosome<G>...) - Static method in class org.jenetics.Genotype
Create a new Genotype from a given array of Chromosomes.
of(Factory<? extends Chromosome<G>>, int) - Static method in class org.jenetics.Genotype
Create a new Genotype which consists of n chromosomes, which are created by the given factory.
of(Iterable<? extends Chromosome<G>>) - Static method in class org.jenetics.Genotype
Create a new Genotype from a given array of chromosomes.
of(IntegerGene...) - Static method in class org.jenetics.IntegerChromosome
Create a new IntegerChromosome with the given genes.
of(int, int, int) - Static method in class org.jenetics.IntegerChromosome
Create a new random IntegerChromosome.
of(IntRange, int) - Static method in class org.jenetics.IntegerChromosome
Create a new random IntegerChromosome.
of(int, int) - Static method in class org.jenetics.IntegerChromosome
Create a new random IntegerChromosome of length one.
of(IntRange) - Static method in class org.jenetics.IntegerChromosome
Create a new random IntegerChromosome of length one.
of(int, int, int) - Static method in class org.jenetics.IntegerGene
Create a new random IntegerGene with the given value and the given range.
of(int, IntRange) - Static method in class org.jenetics.IntegerGene
Create a new random IntegerGene with the given value and the given range.
of(int, int) - Static method in class org.jenetics.IntegerGene
Create a new random IntegerGene.
of(IntRange) - Static method in class org.jenetics.IntegerGene
Create a new random IntegerGene.
of(LongGene...) - Static method in class org.jenetics.LongChromosome
Create a new LongChromosome with the given genes.
of(long, long, int) - Static method in class org.jenetics.LongChromosome
Create a new random LongChromosome.
of(LongRange, int) - Static method in class org.jenetics.LongChromosome
Create a new random LongChromosome.
of(long, long) - Static method in class org.jenetics.LongChromosome
Create a new random LongChromosome of length one.
of(LongRange) - Static method in class org.jenetics.LongChromosome
Create a new random LongChromosome of length one.
of(long, long, long) - Static method in class org.jenetics.LongGene
Create a new random LongGene with the given value and the given range.
of(long, LongRange) - Static method in class org.jenetics.LongGene
Create a new random LongGene with the given value and the given range.
of(long, long) - Static method in class org.jenetics.LongGene
Create a new random LongGene.
of(LongRange) - Static method in class org.jenetics.LongGene
Create a new random LongGene.
of(ISeq<? extends T>, int) - Static method in class org.jenetics.PermutationChromosome
Create a new, random chromosome with the given valid alleles and the desired length.
of(ISeq<? extends T>) - Static method in class org.jenetics.PermutationChromosome
Create a new, random chromosome with the given valid alleles.
of(T...) - Static method in class org.jenetics.PermutationChromosome
Create a new, random chromosome with the given valid alleles.
of(Genotype<G>, long, Function<? super Genotype<G>, C>) - Static method in class org.jenetics.Phenotype
The Genotype is copied to guarantee an immutable class.
of(Genotype<G>, long, Function<? super Genotype<G>, ? extends C>, Function<? super C, ? extends C>) - Static method in class org.jenetics.Phenotype
Create a new phenotype from the given arguments.
of(long, double, double, double, double, double, double, double) - Static method in class org.jenetics.stat.DoubleMoments
Create an immutable object which contains statistical values.
of(DoubleMomentStatistics) - Static method in class org.jenetics.stat.DoubleMoments
Return a new value object of the statistical moments, currently represented by the statistics object.
of(long, double, double, double, double) - Static method in class org.jenetics.stat.DoubleSummary
Create an immutable object which contains statistical summary values.
of(DoubleSummaryStatistics) - Static method in class org.jenetics.stat.DoubleSummary
Return a new value object of the statistical summary, currently represented by the statistics object.
of(long, int, int, long, double, double, double, double) - Static method in class org.jenetics.stat.IntMoments
Create an immutable object which contains statistical values.
of(IntMomentStatistics) - Static method in class org.jenetics.stat.IntMoments
Return a new value object of the statistical moments, currently represented by the statistics object.
of(long, int, int, long, double) - Static method in class org.jenetics.stat.IntSummary
Create an immutable object which contains statistical summary values.
of(IntSummaryStatistics) - Static method in class org.jenetics.stat.IntSummary
Return a new value object of the statistical summary, currently represented by the statistics object.
of(long, long, long, long, double, double, double, double) - Static method in class org.jenetics.stat.LongMoments
Create an immutable object which contains statistical values.
of(LongMomentStatistics) - Static method in class org.jenetics.stat.LongMoments
Return a new value object of the statistical moments, currently represented by the statistics object.
of(long, long, long, long, double) - Static method in class org.jenetics.stat.LongSummary
Create an immutable object which contains statistical summary values.
of(LongSummaryStatistics) - Static method in class org.jenetics.stat.LongSummary
Return a new value object of the statistical summary, currently represented by the statistics object.
of(Comparator<? super T>) - Static method in class org.jenetics.stat.MinMax
Create a new MinMax consumer with the given Comparator.
of() - Static method in class org.jenetics.stat.MinMax
Create a new MinMax consumer.
of(CharSequence) - Static method in class org.jenetics.util.CharSeq
Expands the character range for the given pattern.
of(char, char) - Static method in class org.jenetics.util.CharSeq
Expands the characters between a and b.
of(double, double) - Static method in class org.jenetics.util.DoubleRange
Create a new DoubleRange object with the given min and max values.
of(int, int) - Static method in class org.jenetics.util.IntRange
Create a new IntRange object with the given min and max values.
of(T...) - Static method in interface org.jenetics.util.ISeq
Create a new ISeq from the given values.
of(Iterable<? extends T>) - Static method in interface org.jenetics.util.ISeq
Create a new ISeq from the given values.
of(Supplier<? extends T>, int) - Static method in interface org.jenetics.util.ISeq
Creates a new sequence, which is filled with objects created be the given supplier.
of(long, long) - Static method in class org.jenetics.util.LCG64ShiftRandom.Param
 
of(long, long) - Static method in class org.jenetics.util.LongRange
Create a new LongRange object with the given min and max values.
of(T...) - Static method in interface org.jenetics.util.MSeq
Create a new MSeq from the given values.
of(Iterable<? extends T>) - Static method in interface org.jenetics.util.MSeq
Create a new MSeq from the given values.
of(Supplier<? extends T>, int) - Static method in interface org.jenetics.util.MSeq
Creates a new sequence, which is filled with objects created be the given supplier.
of(Seq<T>) - Static method in interface org.jenetics.util.MSeq
Create a new MSeq from the values of the given Seq.
of(LongSupplier) - Static method in class org.jenetics.util.Random64
Create a new Random64 instance, where the random numbers are generated by the given long supplier.
of(T...) - Static method in interface org.jenetics.util.Seq
Create a new Seq from the given values.
of(Iterable<? extends T>) - Static method in interface org.jenetics.util.Seq
Create a new Seq from the given values.
of(Supplier<? extends T>, int) - Static method in interface org.jenetics.util.Seq
Creates a new sequence, which is filled with objects created be the given supplier.
ofComparable() - Static method in class org.jenetics.engine.EvolutionStatistics
 
offspringFraction(double) - Method in class org.jenetics.engine.Engine.Builder
The offspring fraction.
offspringSelector(Selector<G, C>) - Method in class org.jenetics.engine.Engine.Builder
The selector used for selecting the offspring population.
offspringSize(int) - Method in class org.jenetics.engine.Engine.Builder
The number of offspring individuals.
ofInteger(int) - Static method in class org.jenetics.PermutationChromosome
Create a integer permutation chromosome with the given length.
ofInteger(int, int) - Static method in class org.jenetics.PermutationChromosome
Create an integer permutation chromosome with the given range.
ofInteger(IntRange, int) - Static method in class org.jenetics.PermutationChromosome
Create an integer permutation chromosome with the given range and length
ofLength(int) - Static method in interface org.jenetics.util.MSeq
Create a new MSeq with the given length.
ofNumber() - Static method in class org.jenetics.engine.EvolutionStatistics
 
ofPermutation(int) - Static method in class org.jenetics.engine.codecs
Create a permutation Codec of integer in the range [0, length).
ofPermutation(T...) - Static method in class org.jenetics.engine.codecs
Deprecated.
ofPermutation(ISeq<T>) - Static method in class org.jenetics.engine.codecs
Create a permutation Codec with the given alleles.
ofScalar(IntRange) - Static method in class org.jenetics.engine.codecs
Return a scalar Codec for the given range.
ofScalar(LongRange) - Static method in class org.jenetics.engine.codecs
Return a scalar Codec for the given range.
ofScalar(DoubleRange) - Static method in class org.jenetics.engine.codecs
Return a scalar Codec for the given range.
ofScalar(Supplier<? extends A>, Predicate<? super A>) - Static method in class org.jenetics.engine.codecs
Return a scala Codec with the given allele Supplier and allele validator.
ofScalar(Supplier<? extends A>) - Static method in class org.jenetics.engine.codecs
Return a scala Codec with the given allele Supplier and allele validator.
ofSubSet(ISeq<? extends T>) - Static method in class org.jenetics.engine.codecs
The subset Codec can be used for problems where it is required to find the best variable-sized subset from given basic set.
ofSubSet(ISeq<? extends T>, int) - Static method in class org.jenetics.engine.codecs
The subset Codec can be used for problems where it is required to find the best fixed-size subset from given basic set.
ofVector(IntRange, int) - Static method in class org.jenetics.engine.codecs
Return a vector Codec for the given range.
ofVector(LongRange, int) - Static method in class org.jenetics.engine.codecs
Return a vector Codec for the given range.
ofVector(DoubleRange, int) - Static method in class org.jenetics.engine.codecs
Return a vector Codec for the given range.
ofVector(IntRange...) - Static method in class org.jenetics.engine.codecs
Create a vector Codec for the given ranges.
ofVector(LongRange...) - Static method in class org.jenetics.engine.codecs
Create a vector Codec for the given ranges.
ofVector(DoubleRange...) - Static method in class org.jenetics.engine.codecs
Create a vector Codec for the given ranges.
ofVector(Supplier<? extends A>, IntFunction<A[]>, Predicate<? super A>, Predicate<? super ISeq<? super A>>, int) - Static method in class org.jenetics.engine.codecs
ofVector(Supplier<? extends A>, Predicate<? super A>, Predicate<? super ISeq<? super A>>, int) - Static method in class org.jenetics.engine.codecs
Return a scala Codec with the given allele Supplier, allele validator and Chromosome length.
ofVector(Supplier<? extends A>, IntFunction<A[]>, Predicate<? super A>, int) - Static method in class org.jenetics.engine.codecs
ofVector(Supplier<? extends A>, Predicate<? super A>, int) - Static method in class org.jenetics.engine.codecs
Return a scala Codec with the given allele Supplier, allele validator and Chromosome length.
ofVector(Supplier<? extends A>, IntFunction<A[]>, int) - Static method in class org.jenetics.engine.codecs
Deprecated.
ofVector(Supplier<? extends A>, int) - Static method in class org.jenetics.engine.codecs
Return a scala Codec with the given allele Supplier and Chromosome length.
ONE - Static variable in enum org.jenetics.BitGene
 
ones() - Method in class org.jenetics.BitChromosome
Return the indexes of the ones of this bit-chromosome as stream.
optimize(Optimize) - Method in class org.jenetics.engine.Engine.Builder
The optimization strategy used by the engine.
Optimize - Enum in org.jenetics
This enum determines whether the GA should maximize or minimize the fitness function.
org.jenetics - package org.jenetics
This is the base package of the Jenetics library and contains all domain classes, like Gene, Chromosome or Genotype.
org.jenetics.engine - package org.jenetics.engine
This package contains classes which performs the actual evolution.
org.jenetics.stat - package org.jenetics.stat
This package contains additional statistics classes which are not available in the Java core library.
org.jenetics.util - package org.jenetics.util
This package contains the collection classes (Seq, ISeq and MSeq) which are used in the public interfaces of the Chromosome and Genotype.

P

parallelStream() - Method in interface org.jenetics.util.Seq
Returns a possibly parallel Stream with this sequence as its source.
PartiallyMatchedCrossover<T,C extends Comparable<? super C>> - Class in org.jenetics
The PartiallyMatchedCrossover (PMX) guarantees that all Genes are found exactly once in each chromosome.
PartiallyMatchedCrossover(double) - Constructor for class org.jenetics.PartiallyMatchedCrossover
 
PermutationChromosome<T> - Class in org.jenetics
This chromosome can be used to model permutations of a given (sub) set of alleles.
PermutationChromosome(ISeq<EnumGene<T>>) - Constructor for class org.jenetics.PermutationChromosome
Create a new PermutationChromosome from the given genes.
Phenotype<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
The Phenotype consists of a Genotype plus a fitness Function, where the fitness Function represents the environment where the Genotype lives.
phenotypeValidator(Predicate<? super Phenotype<G, C>>) - Method in class org.jenetics.engine.Engine.Builder
The phenotype validator used for detecting invalid individuals.
Population<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
A population is a collection of Phenotypes.
Population(Collection<Phenotype<G, C>>) - Constructor for class org.jenetics.Population
Constructs a population containing the elements of the specified collection, in the order they are returned by the collection's iterator.
Population(int) - Constructor for class org.jenetics.Population
Creating a new Population with the pre-allocated population size.
Population() - Constructor for class org.jenetics.Population
Creating a new Population.
populationSize(int) - Method in class org.jenetics.engine.Engine.Builder
The number of individuals which form the population.
populationSort() - Method in class org.jenetics.Population
Sorting the phenotypes in this population according to its fitness value in descending order.
prepend(T...) - Method in interface org.jenetics.util.ISeq
 
prepend(Iterable<? extends T>) - Method in interface org.jenetics.util.ISeq
 
prepend(T...) - Method in interface org.jenetics.util.MSeq
 
prepend(Iterable<? extends T>) - Method in interface org.jenetics.util.MSeq
 
prepend(T...) - Method in interface org.jenetics.util.Seq
Return a new Seq with the given values prepended.
prepend(Iterable<? extends T>) - Method in interface org.jenetics.util.Seq
Return a new Seq with the given values prepended.
probabilities(Population<G, N>, int) - Method in class org.jenetics.BoltzmannSelector
 
probabilities(Population<G, C>, int) - Method in class org.jenetics.ExponentialRankSelector
This method sorts the population in descending order while calculating the selection probabilities.
probabilities(Population<G, C>, int) - Method in class org.jenetics.LinearRankSelector
This method sorts the population in descending order while calculating the selection probabilities.
probabilities(Population<G, C>, int, Optimize) - Method in class org.jenetics.ProbabilitySelector
This method takes the probabilities from the ProbabilitySelector.probabilities(Population, int) method and inverts it if needed.
probabilities(Population<G, C>, int) - Method in class org.jenetics.ProbabilitySelector
Return an Probability array, which corresponds to the given Population.
probabilities(Population<G, N>, int) - Method in class org.jenetics.RouletteWheelSelector
 
ProbabilitySelector<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
Probability selectors are a variation of fitness proportional selectors and selects individuals from a given population based on it's selection probability P(i).
ProbabilitySelector(boolean) - Constructor for class org.jenetics.ProbabilitySelector
Create a new ProbabilitySelector with the given sorting flag.
ProbabilitySelector() - Constructor for class org.jenetics.ProbabilitySelector
Create a new selector with sorted = false.
Problem<T,G extends Gene<?,G>,C extends Comparable<? super C>> - Interface in org.jenetics.engine
This interface describes a problem which can be solved by the GA evolution Engine.

Q

Quantile - Class in org.jenetics.stat
Implementation of the quantile estimation algorithm published by
Quantile(double) - Constructor for class org.jenetics.stat.Quantile
Create a new quantile accumulator with the given value.

R

Random64 - Class in org.jenetics.util
An abstract base class which eases the implementation of Random objects which natively creates random long values.
Random64(long) - Constructor for class org.jenetics.util.Random64
 
Random64() - Constructor for class org.jenetics.util.Random64
 
RandomRegistry - Class in org.jenetics.util
This class holds the Random engine used for the GA.
read(Class<T>, String) - Method in class org.jenetics.util.IO
Reads an object from the given file.
read(String) - Method in class org.jenetics.util.IO
Reads an object from the given file.
read(Class<T>, Path) - Method in class org.jenetics.util.IO
Reads an object from the given file.
read(Path) - Method in class org.jenetics.util.IO
Reads an object from the given file.
read(Class<T>, File) - Method in class org.jenetics.util.IO
Reads an object from the given file.
read(File) - Method in class org.jenetics.util.IO
Reads an object from the given file.
read(Class<T>, InputStream) - Method in class org.jenetics.util.IO
Reads an object from the given input stream.
read(InputStream) - Method in class org.jenetics.util.IO
Reads an object from the given input stream.
Recombinator<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
An enhanced genetic algorithm (EGA) combine elements of existing solutions in order to create a new solution, with some of the properties of each parent.
Recombinator(double, int) - Constructor for class org.jenetics.Recombinator
Constructs an alterer with a given recombination probability.
recombine(Population<G, C>, int[], long) - Method in class org.jenetics.Crossover
 
recombine(Population<G, C>, int[], long) - Method in class org.jenetics.MeanAlterer
 
recombine(Population<G, C>, int[], long) - Method in class org.jenetics.Recombinator
Recombination template method.
register(Class<?>...) - Static method in class org.jenetics.util.IO.JAXB
Registers the given JAXB model classes.
remove(Phenotype<G, C>) - Method in class org.jenetics.Population
 
remove(Object) - Method in class org.jenetics.Population
 
remove(int) - Method in class org.jenetics.Population
 
removeAll(Collection<?>) - Method in class org.jenetics.Population
 
reset() - Method in class org.jenetics.stat.Quantile
Reset this object to its initial state.
reset() - Static method in class org.jenetics.util.RandomRegistry
Set the random object to it's default value.
retainAll(Collection<?>) - Method in class org.jenetics.Population
 
reverse() - Method in class org.jenetics.Population
Reverse the order of the population.
reverse() - Method in interface org.jenetics.util.MSeq
Reverses the order of the elements this sequence (in place).
RouletteWheelSelector<G extends Gene<?,G>,N extends Number & Comparable<? super N>> - Class in org.jenetics
The roulette-wheel selector is also known as fitness proportional selector, but in the Jenetics library it is implemented as probability selector.
RouletteWheelSelector() - Constructor for class org.jenetics.RouletteWheelSelector
 
RouletteWheelSelector(boolean) - Constructor for class org.jenetics.RouletteWheelSelector
 
run() - Method in class org.jenetics.Phenotype
This method simply calls the Phenotype.evaluate() method.

S

sameState(DoubleMomentStatistics) - Method in class org.jenetics.stat.DoubleMomentStatistics
Compares the state of two DoubleMomentStatistics objects.
sameState(IntMomentStatistics) - Method in class org.jenetics.stat.IntMomentStatistics
Compares the state of two IntMomentStatistics objects.
sameState(LongMomentStatistics) - Method in class org.jenetics.stat.LongMomentStatistics
Compares the state of two LongMomentStatistics objects.
sameState(MinMax<C>) - Method in class org.jenetics.stat.MinMax
Compares the state of two LongMomentStatistics objects.
sameState(Quantile) - Method in class org.jenetics.stat.Quantile
Compares the state of two Quantile objects.
select(Population<G, C>, int, Optimize) - Method in class org.jenetics.MonteCarloSelector
 
select(Population<G, C>, int, Optimize) - Method in class org.jenetics.ProbabilitySelector
 
select(Population<G, C>, int, Optimize) - Method in interface org.jenetics.Selector
Select phenotypes from the Population.
select(Population<G, N>, int, Optimize) - Method in class org.jenetics.StochasticUniversalSelector
This method sorts the population in descending order while calculating the selection probabilities.
select(Population<G, C>, int, Optimize) - Method in class org.jenetics.TournamentSelector
 
select(Population<G, C>, int, Optimize) - Method in class org.jenetics.TruncationSelector
This method sorts the population in descending order while calculating the selection probabilities.
selector(Selector<G, C>) - Method in class org.jenetics.engine.Engine.Builder
The selector used for selecting the survivors and offspring population.
Selector<G extends Gene<?,G>,C extends Comparable<? super C>> - Interface in org.jenetics
Selectors are responsible for selecting a given number of individuals from the population.
Seq<T> - Interface in org.jenetics.util
General interface for a ordered, fixed sized, object sequence.
set(int, Phenotype<G, C>) - Method in class org.jenetics.Population
 
set(int, T) - Method in interface org.jenetics.util.MSeq
Set the value at the given index.
setAll(Iterator<? extends T>) - Method in interface org.jenetics.util.MSeq
Fills the sequence with values of the given iterator.
setAll(Iterable<? extends T>) - Method in interface org.jenetics.util.MSeq
Fills the sequence with values of the given iterable.
setAll(T[]) - Method in interface org.jenetics.util.MSeq
Fill the sequence with the given values.
setRandom(Random) - Static method in class org.jenetics.util.RandomRegistry
Set the new global Random object for the GA.
setRandom(ThreadLocal<? extends Random>) - Static method in class org.jenetics.util.RandomRegistry
Set the new global Random object for the GA.
setSeed(long) - Method in class org.jenetics.util.LCG64ShiftRandom
 
setSeed(long) - Method in class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
 
shortValue(int) - Method in interface org.jenetics.NumericChromosome
Return the short value of this NumericChromosome at the given index.
shortValue() - Method in interface org.jenetics.NumericChromosome
Return the short value of this NumericChromosome at the index 0.
shortValue() - Method in interface org.jenetics.NumericGene
Returns the value of the specified gene as an short.
shuffle() - Method in interface org.jenetics.util.MSeq
Randomize the array using the Random object currently registered in the RandomRegistry class.
shuffle(Random) - Method in interface org.jenetics.util.MSeq
Randomize the array using the given Random object.
SinglePointCrossover<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
Single point crossover
SinglePointCrossover(double) - Constructor for class org.jenetics.SinglePointCrossover
Constructs an alterer with a given recombination probability.
SinglePointCrossover() - Constructor for class org.jenetics.SinglePointCrossover
Create a new single point crossover object with crossover probability of 0.05.
size() - Method in class org.jenetics.Population
 
size() - Method in interface org.jenetics.util.Seq
 
sort(int, int, Comparator<? super T>) - Method in interface org.jenetics.util.MSeq
Sorts this sequence according to the order induced by the specified Comparator.
sort(int, int) - Method in interface org.jenetics.util.MSeq
Sorts this sequence according to the natural order of the elements.
sort(int, Comparator<? super T>) - Method in interface org.jenetics.util.MSeq
Sorts this sequence according to the order induced by the specified Comparator.
sort(int) - Method in interface org.jenetics.util.MSeq
Sorts this sequence according to the natural order of the elements.
sort(Comparator<? super T>) - Method in interface org.jenetics.util.MSeq
Sorts this sequence according to the order induced by the specified Comparator.
sort() - Method in interface org.jenetics.util.MSeq
Sorts this sequence according to the natural order of the elements.
sortWith(Comparator<? super C>) - Method in class org.jenetics.Population
Sort this population according the order defined by the given comparator.
split(int, int) - Method in class org.jenetics.util.LCG64ShiftRandom
Changes the internal state of the PRNG in a way that future calls to LCG64ShiftRandom.nextLong() will generated the sth sub-stream of pth sub-streams.
split(int, int) - Method in class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
 
spliterator() - Method in interface org.jenetics.util.Seq
 
SQR_SCALER - Static variable in class org.jenetics.ExponentialScaler
 
SQRT_SCALER - Static variable in class org.jenetics.ExponentialScaler
 
StochasticUniversalSelector<G extends Gene<?,G>,N extends Number & Comparable<? super N>> - Class in org.jenetics
StochasticUniversalSelector is a method for selecting a population according to some given probability in a way that minimize chance fluctuations.
StochasticUniversalSelector() - Constructor for class org.jenetics.StochasticUniversalSelector
 
stream() - Method in interface org.jenetics.Chromosome
Returns a sequential Stream of genes with this chromosome as its source.
stream() - Method in class org.jenetics.engine.Engine
Create a new infinite evolution stream with a newly created population.
stream(Iterable<Genotype<G>>) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution stream with the given initial individuals.
stream(Iterable<Genotype<G>>, long) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution stream with the given initial individuals.
stream(Population<G, C>) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution stream with the given initial population.
stream(Population<G, C>, long) - Method in class org.jenetics.engine.Engine
Create a new infinite evolution stream with the given initial population.
stream(EvolutionResult<G, C>) - Method in class org.jenetics.engine.Engine
Create a new EvolutionStream starting with a previously evolved EvolutionResult.
stream() - Method in class org.jenetics.Genotype
Returns a sequential Stream of chromosomes with this genotype as its source.
stream() - Method in class org.jenetics.Population
 
stream() - Method in class org.jenetics.util.IntRange
Returns a sequential ordered IntStream from IntRange.getMin() (inclusive) to IntRange.getMax() (exclusive) by an incremental step of 1.
stream() - Method in class org.jenetics.util.LongRange
Returns a sequential ordered LongStream from LongRange.getMin() (inclusive) to LongRange.getMax() (exclusive) by an incremental step of 1.
stream() - Method in interface org.jenetics.util.Seq
Returns a sequential Stream with this sequence as its source.
subList(int, int) - Method in class org.jenetics.Population
 
subSeq(int, int) - Method in interface org.jenetics.util.ISeq
 
subSeq(int) - Method in interface org.jenetics.util.ISeq
 
subSeq(int, int) - Method in interface org.jenetics.util.MSeq
 
subSeq(int) - Method in interface org.jenetics.util.MSeq
 
subSeq(int) - Method in interface org.jenetics.util.Seq
Returns a view of the portion of this sequence between the specified start, inclusive, and end, exclusive.
subSeq(int, int) - Method in interface org.jenetics.util.Seq
Returns a view of the portion of this sequence between the specified start, inclusive, and end, exclusive.
subSequence(int, int) - Method in class org.jenetics.CharacterChromosome
 
subSequence(int, int) - Method in class org.jenetics.util.CharSeq
 
survivorsFraction(double) - Method in class org.jenetics.engine.Engine.Builder
The survivors fraction.
survivorsSelector(Selector<G, C>) - Method in class org.jenetics.engine.Engine.Builder
The selector used for selecting the survivors population.
survivorsSize(int) - Method in class org.jenetics.engine.Engine.Builder
The number of survivors.
swap(int, int) - Method in interface org.jenetics.util.MSeq
Swap the elements at the two positions.
swap(int, int, MSeq<T>, int) - Method in interface org.jenetics.util.MSeq
Swap a given range with a range of the same size with another array.
SwapMutator<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
The SwapMutation changes the order of genes in a chromosome, with the hope of bringing related genes closer together, thereby facilitating the production of building blocks.
SwapMutator(double) - Constructor for class org.jenetics.SwapMutator
Constructs an alterer with a given recombination probability.
SwapMutator() - Constructor for class org.jenetics.SwapMutator
Default constructor, with default mutation probability (Alterer.DEFAULT_ALTER_PROBABILITY).
system(ZoneId) - Static method in class org.jenetics.util.NanoClock
This clock is based on the nano system clock.
systemDefaultZone() - Static method in class org.jenetics.util.NanoClock
This clock is based on the nano system clock.
systemUTC() - Static method in class org.jenetics.util.NanoClock
This clock is based on the nano system clock.

T

ThreadLocal() - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadLocal
Create a new thread local instance of the LCG64ShiftRandom PRNG with the DEFAULT parameters.
ThreadLocal(LCG64ShiftRandom.Param) - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadLocal
Create a new thread local instance of the LCG64ShiftRandom PRNG with the given parameters.
ThreadSafe(long, LCG64ShiftRandom.Param) - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
Deprecated.
Use LCG64ShiftRandom.ThreadSafe(Param, long) instead.
ThreadSafe(LCG64ShiftRandom.Param, long) - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
Create a new PRNG instance with the given parameter and seed.
ThreadSafe(long) - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
Create a new PRNG instance with LCG64ShiftRandom.Param.DEFAULT parameter and the given seed.
ThreadSafe(LCG64ShiftRandom.Param) - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
Create a new PRNG instance with the given parameter and a safe default seed.
ThreadSafe() - Constructor for class org.jenetics.util.LCG64ShiftRandom.ThreadSafe
Create a new PRNG instance with LCG64ShiftRandom.Param.DEFAULT parameter and a safe seed.
toArray(char[]) - Method in class org.jenetics.CharacterChromosome
Returns an char array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class org.jenetics.CharacterChromosome
Returns an char array containing all of the elements in this chromosome in proper sequence.
toArray(double[]) - Method in class org.jenetics.DoubleChromosome
Returns an double array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class org.jenetics.DoubleChromosome
Returns an double array containing all of the elements in this chromosome in proper sequence.
toArray(int[]) - Method in class org.jenetics.IntegerChromosome
Returns an int array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class org.jenetics.IntegerChromosome
Returns an int array containing all of the elements in this chromosome in proper sequence.
toArray(long[]) - Method in class org.jenetics.LongChromosome
Returns an long array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class org.jenetics.LongChromosome
Returns an long array containing all of the elements in this chromosome in proper sequence.
toArray() - Method in class org.jenetics.Population
 
toArray(A[]) - Method in class org.jenetics.Population
 
toArray() - Method in interface org.jenetics.util.Seq
Return an array containing all of the elements in this sequence in right order.
toArray(T[]) - Method in interface org.jenetics.util.Seq
Return an array containing all of the elements in this sequence in right order; the runtime type of the returned array is that of the specified array.
toBestEvolutionResult() - Static method in class org.jenetics.engine.EvolutionResult
Return a collector which collects the best result of an evolution stream.
toBestGenotype() - Static method in class org.jenetics.engine.EvolutionResult
Return a collector which collects the best genotype of an evolution stream.
toBestPhenotype() - Static method in class org.jenetics.engine.EvolutionResult
Return a collector which collects the best phenotype of an evolution stream.
toBestResult(Function<Genotype<G>, T>) - Static method in class org.jenetics.engine.EvolutionResult
Return a collector which collects the best result (in the native problem space).
toBestResult(Codec<T, G>) - Static method in class org.jenetics.engine.EvolutionResult
Return a collector which collects the best result (in the native problem space).
toBigInteger() - Method in class org.jenetics.BitChromosome
Return the BigInteger value this BitChromosome represents.
toBitSet() - Method in class org.jenetics.BitChromosome
Return the corresponding BitSet of this BitChromosome.
toByteArray(byte[]) - Method in class org.jenetics.BitChromosome
Returns the two's-complement binary representation of this large integer.
toByteArray() - Method in class org.jenetics.BitChromosome
 
toCanonicalString() - Method in class org.jenetics.BitChromosome
Return the BitChromosome as String.
toCharSeq() - Static method in class org.jenetics.util.CharSeq
 
toDoubleMoments(ToDoubleFunction<? super T>) - Static method in class org.jenetics.stat.DoubleMoments
Return a Collector which applies an double-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toDoubleMomentStatistics(ToDoubleFunction<? super T>) - Static method in class org.jenetics.stat.DoubleMomentStatistics
Return a Collector which applies an double-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toDoubleSummary(ToDoubleFunction<? super T>) - Static method in class org.jenetics.stat.DoubleSummary
Return a Collector which applies an double-producing mapping function to each input element, and returns summary-statistics for the resulting values.
toIntMoments(ToIntFunction<? super T>) - Static method in class org.jenetics.stat.IntMoments
Return a Collector which applies an int-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toIntMomentStatistics(ToIntFunction<? super T>) - Static method in class org.jenetics.stat.IntMomentStatistics
Return a Collector which applies an int-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toIntSummary(ToIntFunction<? super T>) - Static method in class org.jenetics.stat.IntSummary
Return a Collector which applies an int-producing mapping function to each input element, and returns summary-statistics for the resulting values.
toISeq(CharSequence) - Static method in class org.jenetics.util.CharSeq
Helper method for creating a sequence of characters from the given CharSequence.
toISeq() - Static method in interface org.jenetics.util.ISeq
Returns a Collector that accumulates the input elements into a new ISeq.
toISeq() - Method in interface org.jenetics.util.MSeq
Return a read-only projection of this sequence.
toLongMoments(ToLongFunction<? super T>) - Static method in class org.jenetics.stat.LongMoments
Return a Collector which applies an long-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toLongMomentStatistics(ToLongFunction<? super T>) - Static method in class org.jenetics.stat.LongMomentStatistics
Return a Collector which applies an long-producing mapping function to each input element, and returns moments-statistics for the resulting values.
toLongSummary(ToLongFunction<? super T>) - Static method in class org.jenetics.stat.LongSummary
Return a Collector which applies an long-producing mapping function to each input element, and returns summary-statistics for the resulting values.
toMedian(ToDoubleFunction<? super T>) - Static method in class org.jenetics.stat.Quantile
Return a Collector which applies an double-producing mapping function to each input element, and returns the median for the resulting values.
toMinMax(Comparator<? super T>) - Static method in class org.jenetics.stat.MinMax
Return a Collector which calculates the minimum and maximum value.
toMinMax() - Static method in class org.jenetics.stat.MinMax
Return a Collector which calculates the minimum and maximum value.
toMSeq() - Static method in interface org.jenetics.util.MSeq
Returns a Collector that accumulates the input elements into a new MSeq.
toPopulation() - Static method in class org.jenetics.Population
Returns a Collector that accumulates the input elements into a new Population.
toQuantile(double, ToDoubleFunction<? super T>) - Static method in class org.jenetics.stat.Quantile
Return a Collector which applies an double-producing mapping function to each input element, and returns quantiles for the resulting values.
toSeq() - Method in class org.jenetics.AbstractChromosome
 
toSeq() - Method in class org.jenetics.BitChromosome
 
toSeq() - Method in interface org.jenetics.Chromosome
Return an unmodifiable sequence of the genes of this chromosome.
toSeq() - Method in class org.jenetics.Genotype
 
toSeq() - Static method in interface org.jenetics.util.Seq
Returns a Collector that accumulates the input elements into a new Seq.
toString() - Method in class org.jenetics.AbstractChromosome
 
toString() - Method in class org.jenetics.AnyGene
 
toString() - Method in class org.jenetics.BitChromosome
 
toString() - Method in enum org.jenetics.BitGene
 
toString() - Method in class org.jenetics.BoltzmannSelector
 
toString() - Method in class org.jenetics.CharacterChromosome
 
toString() - Method in class org.jenetics.CharacterGene
 
toString() - Method in class org.jenetics.engine.EvolutionStart
 
toString() - Method in class org.jenetics.engine.EvolutionStatistics
 
toString() - Method in class org.jenetics.EnumGene
 
toString() - Method in class org.jenetics.ExponentialRankSelector
 
toString() - Method in class org.jenetics.ExponentialScaler
 
toString() - Method in class org.jenetics.GaussianMutator
 
toString() - Method in class org.jenetics.Genotype
 
toString() - Method in class org.jenetics.IntermediateCrossover
 
toString() - Method in class org.jenetics.LinearRankSelector
 
toString() - Method in class org.jenetics.LineCrossover
 
toString() - Method in class org.jenetics.MeanAlterer
 
toString() - Method in class org.jenetics.MonteCarloSelector
 
toString() - Method in class org.jenetics.MultiPointCrossover
 
toString() - Method in class org.jenetics.Mutator
 
toString() - Method in class org.jenetics.PartiallyMatchedCrossover
 
toString() - Method in class org.jenetics.PermutationChromosome
 
toString() - Method in class org.jenetics.Phenotype
 
toString() - Method in class org.jenetics.Population
 
toString() - Method in class org.jenetics.RouletteWheelSelector
 
toString() - Method in class org.jenetics.SinglePointCrossover
 
toString() - Method in class org.jenetics.stat.DoubleMoments
 
toString() - Method in class org.jenetics.stat.DoubleMomentStatistics
 
toString() - Method in class org.jenetics.stat.DoubleSummary
 
toString() - Method in class org.jenetics.stat.IntMoments
 
toString() - Method in class org.jenetics.stat.IntMomentStatistics
 
toString() - Method in class org.jenetics.stat.IntSummary
 
toString() - Method in class org.jenetics.stat.LongMoments
 
toString() - Method in class org.jenetics.stat.LongMomentStatistics
 
toString() - Method in class org.jenetics.stat.LongSummary
 
toString() - Method in class org.jenetics.stat.MinMax
 
toString() - Method in class org.jenetics.stat.Quantile
 
toString() - Method in class org.jenetics.StochasticUniversalSelector
 
toString() - Method in class org.jenetics.SwapMutator
 
toString() - Method in class org.jenetics.TournamentSelector
 
toString() - Method in class org.jenetics.TruncationSelector
 
toString() - Method in class org.jenetics.util.CharSeq
 
toString() - Method in class org.jenetics.util.DoubleRange
 
toString() - Method in class org.jenetics.util.IntRange
 
toString() - Method in class org.jenetics.util.LCG64ShiftRandom.Param
 
toString() - Method in class org.jenetics.util.LCG64ShiftRandom
 
toString() - Method in class org.jenetics.util.LongRange
 
toString() - Method in class org.jenetics.util.NanoClock
 
toString(String, String, String) - Method in interface org.jenetics.util.Seq
Create a string representation of the given sequence.
toString(String) - Method in interface org.jenetics.util.Seq
Create a string representation of the given sequence.
TournamentSelector<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
In tournament selection the best individual from a random sample of s individuals is chosen from the population Pg.
TournamentSelector(int) - Constructor for class org.jenetics.TournamentSelector
Create a tournament selector with the give sample size.
TournamentSelector() - Constructor for class org.jenetics.TournamentSelector
Create a tournament selector with sample size two.
TruncationSelector<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
In truncation selection individuals are sorted according to their fitness.
TruncationSelector(int) - Constructor for class org.jenetics.TruncationSelector
Create a new TruncationSelector object, where the worst selected individual has rank n.
TruncationSelector() - Constructor for class org.jenetics.TruncationSelector
Create a new TruncationSelector object.

U

UniformCrossover<G extends Gene<?,G>,C extends Comparable<? super C>> - Class in org.jenetics
The uniform crossover uses swaps single genes between two chromosomes, instead of whole ranges as in single- and multi-point crossover.
UniformCrossover(double, double) - Constructor for class org.jenetics.UniformCrossover
Create a new universal crossover instance.
UniformCrossover(double) - Constructor for class org.jenetics.UniformCrossover
Create a new universal crossover instance.
UniformCrossover() - Constructor for class org.jenetics.UniformCrossover
Create a new universal crossover instance.
upcast(ISeq<B>) - Static method in interface org.jenetics.util.ISeq
Allows a safe (without compile warning) upcast from B to A.
using(R, Consumer<? super R>) - Static method in class org.jenetics.util.RandomRegistry
Executes the consumer code using the given random engine.
using(ThreadLocal<R>, Consumer<? super R>) - Static method in class org.jenetics.util.RandomRegistry
Executes the consumer code using the given random engine.

V

valueOf(String) - Static method in enum org.jenetics.BitGene
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.jenetics.Optimize
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.jenetics.BitGene
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.jenetics.Optimize
Returns an array containing the constants of this enum type, in the order they are declared.
Verifiable - Interface in org.jenetics.util
 

W

with(R, Function<? super R, ? extends T>) - Static method in class org.jenetics.util.RandomRegistry
Opens a new Scope with the given random engine and executes the given function within it.
with(ThreadLocal<R>, Function<? super R, ? extends T>) - Static method in class org.jenetics.util.RandomRegistry
Opens a new Scope with the given random engine and executes the given function within it.
withZone(ZoneId) - Method in class org.jenetics.util.NanoClock
 
worst(C, C) - Method in enum org.jenetics.Optimize
Return the worst value, according to this optimization direction.
write(Object, String) - Method in class org.jenetics.util.IO
Write the (serializable) object to the given path.
write(Object, Path) - Method in class org.jenetics.util.IO
Write the (serializable) object to the given path.
write(Object, File) - Method in class org.jenetics.util.IO
Write the (serializable) object to the given file.
write(Object, OutputStream) - Method in class org.jenetics.util.IO
Write the (serializable) object to the given output stream.

Z

ZERO - Static variable in enum org.jenetics.BitGene
 
ZERO - Static variable in class org.jenetics.engine.EvolutionDurations
Constant for zero evolution durations.
zeros() - Method in class org.jenetics.BitChromosome
Return the indexes of the zeros of this bit-chromosome as stream.

_

_genes - Variable in class org.jenetics.AbstractChromosome
Array of genes which forms the chromosome.
_genes - Variable in class org.jenetics.BitChromosome
The boolean array which holds the BitGenes.
_length - Variable in class org.jenetics.BitChromosome
The length of the chromosomes (number of bits).
_p - Variable in class org.jenetics.BitChromosome
The ones probability of the randomly generated Chromosome.
_probability - Variable in class org.jenetics.AbstractAlterer
The altering probability.
_valid - Variable in class org.jenetics.AbstractChromosome
Indicates whether this chromosome is valid or not.
A B C D E F G H I J L M N O P Q R S T U V W Z _ 
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© 2007-2017 Franz Wilhelmstötter  (2017-04-28 16:50)